RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 IFNGR2P38484 337 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 KIAA1024LP59773 190 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 CHRNEQ04844 493 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 RGS1Q08116 209 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 CDC20Q12834 499 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 ATAD3BQ5T9A4 648 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 ACSM5Q6NUN0 579 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 GDPGP1Q6ZNW5 385 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 C16orf62Q7Z3J2 963 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 VN1R4Q7Z5H5 301 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 GJD3Q8N144 294 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 ZBTB8BQ8NAP8 495 aaPredicted RBP15.81■□□□□ 0.12
NUP50-203ENST00000407019 KCT2Q8NC54 265 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 GNPDA2Q8TDQ7 276 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 LRR1Q96L50 414 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 ZNF582Q96NG8 517 aaPredicted RBP15.81■□□□□ 0.12
NUP50-203ENST00000407019 CNPPD1Q9BV87 410 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 ACTRT3Q9BYD9 372 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 POLR2J2Q9GZM3 115 aaKnown RBP15.81■□□□□ 0.12
NUP50-203ENST00000407019 ANKRA2Q9H9E1 313 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 FBRSQ9HAH7 460 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 CPNE5Q9HCH3 593 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 C5orf42Q9H799 3197 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 DOCK8Q8NF50 2099 aa15.81■□□□□ 0.12
NUP50-203ENST00000407019 PNMA8CA0A1B0GUJ8 204 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 CYP7B1O75881 506 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 RAB36O95755 333 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 EML2O95834 649 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 ZNF888P0CJ79 500 aaPredicted RBP15.8■□□□□ 0.12
NUP50-203ENST00000407019 LAMP2P13473 410 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 PBX2P40425 430 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 ETV6P41212 452 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 MLLT11Q13015 90 aaPredicted RBP15.8■□□□□ 0.12
NUP50-203ENST00000407019 SLC13A2Q13183 592 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 LTB4RQ15722 352 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 ANKRD54Q6NXT1 300 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 ASPGQ86U10 573 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 VRK2Q86Y07 508 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 KIF18BQ86Y91 864 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 RBM12BQ8IXT5 1001 aaKnown RBP15.8■□□□□ 0.12
NUP50-203ENST00000407019 FAM83FQ8NEG4 500 aaPredicted RBP15.8■□□□□ 0.12
NUP50-203ENST00000407019 OR52I1Q8NGK6 324 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 OR9Q1Q8NGQ5 310 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 TEX47Q8TBZ9 253 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 OR1E3Q8WZA6 343 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 KAT2AQ92830 837 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 ASPNQ9BXN1 380 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 PBX4Q9BYU1 374 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 NDUFB11Q9NX14 153 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 QPCTLQ9NXS2 382 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 CRNNQ9UBG3 495 aaPredicted RBP15.8■□□□□ 0.12
NUP50-203ENST00000407019 KLF15Q9UIH9 416 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 STUB1Q9UNE7 303 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 A0A075B6Q4 140 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 A0A087WUU8 490 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 POM121BA6NF01 834 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 FAM170BA6NMN3 283 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 HOXC4P09017 264 aaPredicted RBP15.8■□□□□ 0.12
NUP50-203ENST00000407019 HBQ1P09105 142 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 HOXB2P14652 356 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 COL9A1P20849 921 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 PSMA1P25786 263 aaKnown RBP15.8■□□□□ 0.12
NUP50-203ENST00000407019 CLDN2P57739 230 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 CBX3Q13185 183 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 TRAM2Q15035 370 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 TCEA2Q15560 299 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 SNAPC1Q16533 368 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 ENPP7Q6UWV6 458 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 POC5Q8NA72 575 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 NT5CQ8TCD5 201 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 FGF11Q92914 225 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 GIMAP5Q96F15 307 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 FCRL4Q96PJ5 515 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 EGLN3Q9H6Z9 239 aa15.8■□□□□ 0.12
NUP50-203ENST00000407019 TRIM45Q9H8W5 580 aaPredicted RBP15.8■□□□□ 0.12
NUP50-203ENST00000407019 CPSF4LA6NMK7 179 aaKnown RBP15.79■□□□□ 0.12
NUP50-203ENST00000407019 FRS3O43559 492 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 IMPDH2P12268 514 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 ALOX12P18054 663 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 AK4P27144 223 aaPredicted RBP15.79■□□□□ 0.12
NUP50-203ENST00000407019 GTF2E2P29084 291 aaKnown RBP15.79■□□□□ 0.12
NUP50-203ENST00000407019 SEPHS1P49903 392 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 EFNB1P98172 346 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 SPANXN2Q5MJ10 180 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 PPP2R2DQ66LE6 453 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 PAQR6Q6TCH4 344 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 TMEM163Q8TC26 289 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 ASB12Q8WXK4 309 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 SLC22A18Q96BI1 424 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 KCNS3Q9BQ31 491 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 PRR14Q9BWN1 585 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 PLA2G12AQ9BZM1 189 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 SRMSQ9H3Y6 488 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 TESQ9UGI8 421 aaKnown RBP15.79■□□□□ 0.12
NUP50-203ENST00000407019 KLHL3Q9UH77 587 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 GPR55Q9Y2T6 319 aaPredicted RBP15.79■□□□□ 0.12
NUP50-203ENST00000407019 PRKAR1BP31321 381 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 IFNA8P32881 189 aa15.79■□□□□ 0.12
NUP50-203ENST00000407019 CRYBB2P43320 205 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms