RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 DNAJC22Q8N4W6 341 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 OR6T1Q8NGN1 323 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 OR9A4Q8NGU2 314 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 RHOXF1Q8NHV9 184 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 APH1BQ8WW43 257 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 TCTN2Q96GX1 697 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 DOK1Q99704 481 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 IMPAD1Q9NX62 359 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 TMEM9Q9P0T7 183 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 PCDHGB1Q9Y5G3 927 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 DSPPQ9NZW4 1301 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 RGS10O43665 173 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 SRPX2O60687 465 aaPredicted RBP23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 MRPS14O60783 128 aaKnown RBP23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 CTSBP07858 339 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 PCMT1P22061 227 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 CRISP1P54107 249 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 UGT2B15P54855 530 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 DEFB133Q30KQ1 61 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 CWF19L1Q69YN2 538 aaKnown RBP23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 VRK2Q86Y07 508 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 DGCR6LQ9BY27 220 aa23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 CACYBPQ9HB71 228 aaKnown RBP23.09■■□□□ 1.29
DNMT3A-206ENST00000406659 A0A087WV62 115 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 A0A1W2PRQ8 180 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 LMO7DNF2Z398 122 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 TRIOO75962 3097 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 PDX1P52945 283 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 EMX1Q04741 257 aaPredicted RBP23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 DGCR6Q14129 220 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 PTGES3Q15185 160 aaKnown RBP23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 PRTGQ2VWP7 1150 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 FHL5Q5TD97 284 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 SHISA5Q8N114 240 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 SIMC1Q8NDZ2 872 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 PRRC1Q96M27 445 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 SCN2AQ99250 2005 aa23.08■■□□□ 1.29
DNMT3A-206ENST00000406659 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 SH3PXD2BA1X283 911 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 H3BMQ9 156 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 CHST10O43529 356 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 SLITRK5O94991 958 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 ACP2P11117 423 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 TMBIM6P55061 237 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 CDC42P60953 191 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 NDUFA9Q16795 377 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 MLIPQ5VWP3 458 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 SDR16C5Q8N3Y7 309 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 SVOPQ8N4V2 548 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 OR52P1PQ8NH57 321 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 DOK4Q8TEW6 326 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 CLDN23Q96B33 292 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 ZG16BQ96DA0 208 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 COG8Q96MW5 612 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 FUZQ9BT04 418 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 NAA50Q9GZZ1 169 aaKnown RBP23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 MTHFD2LQ9H903 347 aaPredicted RBP23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 ADAP2Q9NPF8 381 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 FTSJ1Q9UET6 329 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 WARS2Q9UGM6 360 aaKnown RBP23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 PCDHGA10Q9Y5H3 936 aa23.07■■□□□ 1.28
DNMT3A-206ENST00000406659 ZNF99A8MXY4 864 aaPredicted RBP23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 PLOD3O60568 738 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 FCMRO60667 390 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 CHMP24386 653 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 POU1F1P28069 291 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 CSNK1EP49674 416 aaKnown RBP23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 SKP1P63208 163 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 DYNC1I2Q13409 638 aaKnown RBP23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 DUSP5Q16690 384 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 ARHGAP11BQ3KRB8 267 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 PODNL1Q6PEZ8 512 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 DHRS4L2Q6PKH6 230 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 C17orf82Q86X59 251 aaPredicted RBP23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 ARHGEF39Q8N4T4 335 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 LINC00471Q8N535 108 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 C1orf216Q8TAB5 229 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 SLC7A13Q8TCU3 470 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 ARHGDIGQ99819 225 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 KLHL28Q9NXS3 571 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 ZNF226Q9NYT6 803 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 ZAR1LA6NP61 321 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 TPST2O60704 377 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 SDC3O75056 442 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 MT-ND2P03891 347 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 ALOX5P09917 674 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 OSMP13725 252 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 BCKDHBP21953 392 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 PRKAR1BP31321 381 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 SOX18P35713 384 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 CTSKP43235 329 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 C21orf59P57076 290 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 PGBD2Q6P3X8 592 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 OGFOD3Q6PK18 319 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 FRRS1Q6ZNA5 592 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 Q7L0L9 218 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 FAR1Q8WVX9 515 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 NR4A3Q92570 626 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 RORBQ92753 470 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 ANKRD9Q96BM1 317 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms