RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 C6orf10Q5SRN2 563 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 BHLHB9Q6PI77 547 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 NPSR1Q6W5P4 371 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 DNAJC14Q6Y2X3 702 aaPredicted RBP27.12■■□□□ 1.93
USP42-202ENST00000404008 TRIML2Q8N7C3 387 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 LMF2Q9BU23 707 aaKnown RBP27.12■■□□□ 1.93
USP42-202ENST00000404008 GPATCH2Q9NW75 528 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 PLA2G3Q9NZ20 509 aa27.12■■□□□ 1.93
USP42-202ENST00000404008 FRG2CA6NGY1 282 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 CDK2AP1O14519 115 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 PTPN6P29350 595 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 MAP3K8P41279 467 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 ST13P50502 369 aaKnown RBP27.11■■□□□ 1.93
USP42-202ENST00000404008 PSG6Q00889 435 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 LACTB2Q53H82 288 aaPredicted RBP27.11■■□□□ 1.93
USP42-202ENST00000404008 ZCCHC12Q6PEW1 402 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 ZNF621Q6ZSS3 439 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 WDR53Q7Z5U6 358 aaPredicted RBP27.11■■□□□ 1.93
USP42-202ENST00000404008 HPS6Q86YV9 775 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 SLC15A4Q8N697 577 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 CDRT4Q8N9R6 151 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 SLC22A8Q8TCC7 542 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 TM9SF4Q92544 642 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 HAS2Q92819 552 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 C16orf58Q96GQ5 468 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 SLC35A5Q9BS91 424 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 PAIP1Q9H074 479 aaKnown RBP27.11■■□□□ 1.93
USP42-202ENST00000404008 LEF1Q9UJU2 399 aaPredicted RBP27.11■■□□□ 1.93
USP42-202ENST00000404008 NDUFAF1Q9Y375 327 aa27.11■■□□□ 1.93
USP42-202ENST00000404008 ANGPT2O15123 496 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 ACOX3O15254 700 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 ZCCHC18P0CG32 403 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 SFTPCP11686 197 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 TUBA3CQ13748 450 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 MAPRE2Q15555 327 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 EXOSC6Q5RKV6 272 aaKnown RBP27.1■■□□□ 1.93
USP42-202ENST00000404008 ZNF468Q5VIY5 522 aaPredicted RBP27.1■■□□□ 1.93
USP42-202ENST00000404008 TUBA3EQ6PEY2 450 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 ASB18Q6ZVZ8 466 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 C6orf120Q7Z4R8 191 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 TAGAPQ8N103 731 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 HSPBAP1Q96EW2 488 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 PHF12Q96QT6 1004 aa27.1■■□□□ 1.93
USP42-202ENST00000404008 ZNF71Q9NQZ8 489 aaPredicted RBP27.1■■□□□ 1.93
USP42-202ENST00000404008 RYDENQ9NUL5 291 aaKnown RBP27.1■■□□□ 1.93
USP42-202ENST00000404008 A0A096LPI6 279 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 TO15178 435 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 ANP32DO95626 131 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 F10P00742 488 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 HOXB9P17482 250 aaPredicted RBP27.09■■□□□ 1.93
USP42-202ENST00000404008 SOX3P41225 446 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 CD97P48960 835 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 PRIM2P49643 509 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 LY6DQ14210 128 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 LASP1Q14847 261 aaKnown RBP27.09■■□□□ 1.93
USP42-202ENST00000404008 ZNHIT3Q15649 155 aaPredicted RBP27.09■■□□□ 1.93
USP42-202ENST00000404008 SAXO2Q658L1 398 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 TMEM156Q8N614 296 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 BCAS4Q8TDM0 211 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 ASB15Q8WXK1 588 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 NEURL3Q96EH8 262 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 UBL7Q96S82 380 aaPredicted RBP27.09■■□□□ 1.93
USP42-202ENST00000404008 UTP23Q9BRU9 249 aaKnown RBP27.09■■□□□ 1.93
USP42-202ENST00000404008 ANKRD10Q9NXR5 420 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 OR5H15A6NDH6 313 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 TTC36A6NLP5 189 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 NDUFAB1O14561 156 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 DCTN3O75935 186 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 OR6B1O95007 311 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 CHI3L1P36222 383 aaPredicted RBP27.09■■□□□ 1.93
USP42-202ENST00000404008 HLCSP50747 726 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 NRG3P56975 720 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 ARG2P78540 354 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 LRIF1Q5T3J3 769 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 OPN5Q6U736 354 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 LYPD8Q6UX82 237 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 RETREG3Q86VR2 466 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 SNX32Q86XE0 403 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 SLC44A2Q8IWA5 706 aaPredicted RBP27.09■■□□□ 1.93
USP42-202ENST00000404008 CCDC197Q8NCU1 140 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 YIPF4Q9BSR8 244 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 ACTRT3Q9BYD9 372 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 TRIM45Q9H8W5 580 aaPredicted RBP27.09■■□□□ 1.93
USP42-202ENST00000404008 SLAMF8Q9P0V8 285 aa27.09■■□□□ 1.93
USP42-202ENST00000404008 C1QCP02747 245 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 ACP2P11117 423 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 ABCD3P28288 659 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 CD96P40200 585 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 CASRP41180 1078 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 PSPHP78330 225 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 GTDC1Q4AE62 458 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 CDC73Q6P1J9 531 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 TREML1Q86YW5 311 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 ZADH2Q8N4Q0 377 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 DPP10Q8N608 796 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 SLC16A11Q8NCK7 471 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 FBXO30Q8TB52 745 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 SLC9A6Q92581 669 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 SLC35G5Q96KT7 338 aa27.08■■□□□ 1.93
USP42-202ENST00000404008 SLC25A18Q9H1K4 315 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms