RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 PDYNP01213 254 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 HPNP05981 417 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 ENO1P06733 434 aaKnown RBP11.28□□□□□ -0.6
PRAME-204ENST00000403441 FAM58BPP0C7Q3 252 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 SLC35E2P0CK97 266 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 MYL2P10916 166 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 CTSSP25774 331 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 OPRM1P35372 400 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 GALNT1Q10472 559 aaPredicted RBP11.28□□□□□ -0.6
PRAME-204ENST00000403441 IFT88Q13099 833 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 PCLAFQ15004 111 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 TNFAIP8L3Q5GJ75 292 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 BICRALQ6AI39 1079 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 VASNQ6EMK4 673 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 OR52E8Q6IFG1 317 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 TMEM64Q6YI46 380 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 GALNT12Q8IXK2 581 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 C4orf33Q8N1A6 199 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 ZNF441Q8N8Z8 693 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 SPPL2AQ8TCT8 520 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 ANGPTL4Q9BY76 406 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 UBQLN3Q9H347 655 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 C12orf65Q9H3J6 166 aaKnown RBP11.28□□□□□ -0.6
PRAME-204ENST00000403441 NEUROD4Q9HD90 331 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 FARSBQ9NSD9 589 aaKnown RBP11.28□□□□□ -0.6
PRAME-204ENST00000403441 SNX6Q9UNH7 406 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 PLLPQ9Y342 182 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 SLC6A5Q9Y345 797 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 NPFFR2Q9Y5X5 522 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 NINQ8N4C6 2090 aa11.28□□□□□ -0.6
PRAME-204ENST00000403441 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.6
PRAME-204ENST00000403441 A0A1W2PR48 441 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 MBD3L4A6NDZ8 208 aaPredicted RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 MBD3L3A6NE82 208 aaPredicted RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 MBD3L5A6NJ08 208 aaPredicted RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 MANBAO00462 879 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 TYROBPO43914 113 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 ERN1O75460 977 aaKnown RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 AIFM1O95831 613 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 IL18BPO95998 194 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 CLPSP04118 112 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 PIK3R1P27986 724 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 ADSLP30566 484 aaPredicted RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 SSTR4P31391 388 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 ZNF844Q08AG5 666 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 CSTF3Q12996 717 aaKnown RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 NHSL2Q5HYW2 709 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 TCHHL1Q5QJ38 904 aaPredicted RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 FAM219BQ5XKK7 198 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 POMZP3Q6PJE2 187 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 RNF165Q6ZSG1 346 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 GPRIN3Q6ZVF9 776 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 WFDC11Q8NEX6 87 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 MBD3L2Q8NHZ7 208 aaPredicted RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 ABTB1Q969K4 478 aaPredicted RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 C18orf12Q96KH6 178 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 GNRHR2Q96P88 292 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 UGT2B28Q9BY64 529 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 MRPL1Q9BYD6 325 aaKnown RBP11.27□□□□□ -0.61
PRAME-204ENST00000403441 ELOVL6Q9H5J4 265 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 METTL7AQ9H8H3 244 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 CALHM2Q9HA72 323 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 CXorf21Q9HAI6 301 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 SIRT5Q9NXA8 310 aa11.27□□□□□ -0.61
PRAME-204ENST00000403441 NPIPB8E9PQR5 432 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 ACTL6AO96019 429 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 KRT6AP02538 564 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 KRT6BP04259 564 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 TMIGD3P0DMS9 266 aaPredicted RBP11.26□□□□□ -0.61
PRAME-204ENST00000403441 CYP4B1P13584 511 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 CPA3P15088 417 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 BMP7P18075 431 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 CASP3P42574 277 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 CPA2P48052 419 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 KRT6CP48668 564 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 HTR6P50406 440 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 AGFG1P52594 562 aaKnown RBP11.26□□□□□ -0.61
PRAME-204ENST00000403441 NAGLUP54802 743 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 DCAF7P61962 342 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 LTBQ06643 244 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 EIPR1Q53HC9 387 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 WIPI1Q5MNZ9 446 aaPredicted RBP11.26□□□□□ -0.61
PRAME-204ENST00000403441 LIPMQ5VYY2 423 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 TIGD3Q6B0B8 471 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 GALNT18Q6P9A2 607 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 COMMD6Q7Z4G1 85 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 CDYL2Q8N8U2 506 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 GBP7Q8N8V2 638 aaPredicted RBP11.26□□□□□ -0.61
PRAME-204ENST00000403441 C17orf47Q8NEP4 570 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 OR6Y1Q8NGX8 325 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 LINC01560Q8TB33 94 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 SELENOMQ8WWX9 145 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 WDYHV1Q96HA8 205 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 TMEM41AQ96HV5 264 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 SFXN3Q9BWM7 321 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 OR10A5Q9H207 317 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 PLEKHF2Q9H8W4 249 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 TNFRSF12AQ9NP84 129 aa11.26□□□□□ -0.61
PRAME-204ENST00000403441 BEX4Q9NWD9 120 aaPredicted RBP11.26□□□□□ -0.61
PRAME-204ENST00000403441 SENP1Q9P0U3 644 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms