RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 SRRQ9GZT4 340 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 ZSCAN16Q9H4T2 348 aaPredicted RBP3.68□□□□□ -1.82
CLHC1-201ENST00000401408 CARS2Q9HA77 564 aaKnown RBP3.68□□□□□ -1.82
CLHC1-201ENST00000401408 LPAR2Q9HBW0 351 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 RAB9BQ9NP90 201 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 OR2S2Q9NQN1 319 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 ASAH2Q9NR71 780 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 LANCL2Q9NS86 450 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 RAD18Q9NS91 495 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 TAS2R9Q9NYW1 312 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 COPS7AQ9UBW8 275 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 MUTYHQ9UIF7 546 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 STOML2Q9UJZ1 356 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 WASF3Q9UPY6 502 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 ERVW-1Q9UQF0 538 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 RAXQ9Y2V3 346 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 KLF2Q9Y5W3 355 aaPredicted RBP3.68□□□□□ -1.82
CLHC1-201ENST00000401408 NLRC5Q86WI3 1866 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 STK36Q9NRP7 1315 aa3.68□□□□□ -1.82
CLHC1-201ENST00000401408 TRIP12Q14669 1992 aaPredicted RBP3.68□□□□□ -1.82
CLHC1-201ENST00000401408 SCN10AQ9Y5Y9 1956 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 A0A1B0GVL5 298 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 TMEM89A2RUT3 159 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 OR2AT4A6NND4 320 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 DLGAP1O14490 977 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 CCSO14618 274 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 BET1O15155 118 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 TMPRSS2O15393 492 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 CLOCKO15516 846 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 SIAH2O43255 324 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 TIMM8AO60220 97 aaPredicted RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 RSL1D1O76021 490 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 TJP3O95049 919 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 CBX6O95503 412 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 C8AP07357 584 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 ANKRD34CP0C6C1 535 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 FAM157BP0CG42 384 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 SLC35E2BP0CK96 405 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 SLC35E2P0CK97 266 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 NR2F6P10588 404 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 AMD1P17707 334 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 IGFBP2P18065 325 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 DRD4P21917 467 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 ELAVL4P26378 380 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 GSTM2P28161 218 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 SLC8A1P32418 973 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 UGT2B10P36537 528 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 EIF2S3P41091 472 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 ETV4P43268 484 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 GPR12P47775 334 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 NPBWR1P48145 328 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 ZNF135P52742 658 aaPredicted RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 EPHA5P54756 1037 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 PSME3P61289 254 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 RPL15P61313 204 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 MGAT3Q09327 533 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 DUSP8Q13202 625 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 WHAMMP3Q1A5X7 153 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 NDUFAF6Q330K2 333 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 POM121L1PQ3SYA9 428 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 MTX3Q5HYI7 312 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 TMEM196Q5HYL7 178 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 NT5DC1Q5TFE4 455 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 METTL21CQ5VZV1 264 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 GDF6Q6KF10 455 aaPredicted RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 RHBDD2Q6NTF9 364 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 LRRC8BQ6P9F7 803 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 TMEM107Q6UX40 140 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 CXXC5Q7LFL8 322 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 PLA2G4DQ86XP0 818 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 ARHGEF19Q8IW93 802 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 GABRG1Q8N1C3 465 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 CYP4Z2PQ8N1L4 340 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 CPXM2Q8N436 756 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 LNX2Q8N448 690 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 PCDH20Q8N6Y1 951 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 ACBD4Q8NC06 268 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 PAPD5Q8NDF8 572 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 NSUN7Q8NE18 718 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 FAM46DQ8NEK8 389 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 FAR1Q8WVX9 515 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 ACOT11Q8WXI4 607 aaPredicted RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 ST8SIA1Q92185 356 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 ST8SIA2Q92186 375 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 AP3S1Q92572 193 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 AKAP1Q92667 903 aaKnown RBP eCLIP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 SLC38A4Q969I6 547 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 FUBP1Q96AE4 644 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 CPB2Q96IY4 423 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 TGS1Q96RS0 853 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 CMKLR1Q99788 373 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 NPLQ9BXD5 320 aaPredicted RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 XPNPEP1Q9NQW7 623 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 SMPD4Q9NXE4 827 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 THUMPD1Q9NXG2 353 aaKnown RBP3.67□□□□□ -1.82
CLHC1-201ENST00000401408 NAGPAQ9UK23 515 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 FOXJ3Q9UPW0 622 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 NR2E1Q9Y466 385 aa3.67□□□□□ -1.82
CLHC1-201ENST00000401408 TBL2Q9Y4P3 447 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms