RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TEX12Q9BXU0 123 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 BEX1Q9HBH7 125 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF780BQ9Y6R6 833 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 EDDM13A0A1B0GTR0 161 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SMLR1H3BR10 107 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 HPGDSO60760 199 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 RAB36O95755 333 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 ASGR2P07307 311 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SRPRAP08240 638 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 AHRP35869 848 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 OPRD1P41143 372 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 MTNR1AP48039 350 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 STXBP1P61764 594 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 CDK3Q00526 305 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 LARS2Q15031 903 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 DEFB134Q4QY38 66 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SYT14P1Q58G82 188 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 SLC27A4Q6P1M0 643 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 ARL9Q6T311 187 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 PRICKLE2Q7Z3G6 844 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 UFD1Q92890 307 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 FCRL1Q96LA6 429 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 COQ10AQ96MF6 247 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 C6orf106Q9H6K1 298 aaPredicted RBP11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 TBX21Q9UL17 535 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF232Q9UNY5 417 aa11.94□□□□□ -0.5
PPP4R1-202ENST00000400555 BRWD1Q9NSI6 2320 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 LRRC72A6NJI9 287 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SCG5P05408 212 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 CHRM4P08173 479 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SAGP10523 405 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SLC2A2P11168 524 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 IFI30P13284 250 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 CPA6Q8N4T0 437 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 OR51L1Q8NGJ5 315 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 GRHL3Q8TE85 626 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 MCHR1Q99705 422 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 RBCK1Q9BYM8 510 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 FBXL12Q9NXK8 326 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 MEIOCA2RUB1 952 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 HRO43593 1189 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 NARSO43776 548 aaKnown RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 ALPPP05187 535 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 GABRB1P18505 474 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 AK4P27144 223 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF33BQ06732 778 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SLC3A1Q07837 685 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 ILKQ13418 452 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 ADGRD2Q7Z7M1 963 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 ACOT4Q8N9L9 421 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 CYB561A3Q8NBI2 242 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 NUP43Q8NFH3 380 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 OR51A7Q8NH64 312 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 OR52A5Q9H2C5 316 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SERHL2Q9H4I8 314 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF624Q9P2J8 865 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 GPR55Q9Y2T6 319 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 GMFGO60234 142 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 CSNK2A2P19784 350 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 MAPK9P45984 424 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 PCBP3P57721 371 aaKnown RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 TAS2R38P59533 333 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 UNC5DQ6UXZ4 953 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 NKAIN4Q8IVV8 208 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SIMC1Q8NDZ2 872 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 BBS1Q8NFJ9 593 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SETD7Q8WTS6 366 aaKnown RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 LCN9Q8WX39 176 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 ZNF582Q96NG8 517 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 AMDHD1Q96NU7 426 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 HHIPQ96QV1 700 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 PSD2Q9BQI7 771 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SPHK1Q9NYA1 384 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 CCDC59Q9P031 241 aaKnown RBP11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 SNX7Q9UNH6 387 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 INSL6Q9Y581 213 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 ANAPC1Q9H1A4 1944 aa11.93□□□□□ -0.5
PPP4R1-202ENST00000400555 A0A087WUU8 490 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 PRAMEF27A3QJZ7 478 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 SNTNA6NMZ2 147 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 KLHL18O94889 574 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 CPN2P22792 545 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 ITGB7P26010 798 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 KHKP50053 298 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 EEF1A2Q05639 463 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 ATCAYQ86WG3 371 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 NRSN1Q8IZ57 195 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 SPATA5L1Q9BVQ7 753 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 CDCA4Q9BXL8 241 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 C11orf54Q9H0W9 315 aaPredicted RBP11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 ANKHQ9HCJ1 492 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 RPRD1BQ9NQG5 326 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 CNOT2Q9NZN8 540 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 ZFR2Q9UPR6 939 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 PIP5K1CO60331 668 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 MRPS14O60783 128 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 LILRB3O75022 631 aa11.92□□□□□ -0.5
PPP4R1-202ENST00000400555 GYPBP06028 91 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms