RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 POU4F2Q12837 409 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 SHFQ7M4L6 423 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 CASTOR1Q8WTX7 329 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 ZFAND2BQ8WV99 257 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 TMEM45AQ9NWC5 275 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 EPHA6Q9UF33 1036 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 SDK1Q7Z5N4 2213 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 NUAK1O60285 661 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 CSNK1DP48730 415 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 RIN1Q13671 783 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 TAZQ16635 292 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 LRIF1Q5T3J3 769 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 TMPRSS12Q86WS5 348 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 ZNF565Q8N9K5 539 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 CNN2Q99439 309 aaKnown RBP17.25■□□□□ 0.35
COL18A1-204ENST00000400337 SLC30A3Q99726 388 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 GPR45Q9Y5Y3 372 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 HSPA12AO43301 675 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 CYP17A1P05093 508 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 OSMP13725 252 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 STT3AP46977 705 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 E2F1Q01094 437 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 SLC14A2Q15849 920 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 PNCKQ6P2M8 343 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 TMEM151AQ8N4L1 468 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 ACTR10Q9NZ32 417 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 ANTXRLA6NF34 631 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 GJA8P48165 433 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 ZNF84P51523 738 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 PLP2Q04941 152 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 MICAQ29983 383 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 KLHDC9Q8NEP7 349 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 TOR1AIP2Q8NFQ8 470 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 PROKR1Q8TCW9 393 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 MS4A4EQ96PG1 132 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 GSTT2P0CG29 244 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 GLP1RP43220 463 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 MAN2A2P49641 1150 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 FXYD6P3P58550 94 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 GXYLT1Q4G148 440 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 CCSAPQ6IQ19 270 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-204ENST00000400337 OR52E1Q8NGJ3 308 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 ZNF431Q8TF32 576 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-204ENST00000400337 NCDNQ9UBB6 729 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 HCFC2Q9Y5Z7 792 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 A8MV72 311 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-204ENST00000400337 PSMA6P60900 246 aaKnown RBP17.24■□□□□ 0.35
COL18A1-204ENST00000400337 UBQLNLQ8IYU4 475 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 OR5T2Q8NGG2 359 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 STUB1Q9UNE7 303 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 NWD2Q9ULI1 1742 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 PRAMEF2O60811 474 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 PXNP49023 591 aaPredicted RBP17.24■□□□□ 0.35
COL18A1-204ENST00000400337 ACTA2P62736 377 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 ACTG2P63267 376 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 APOFQ13790 326 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 ZNF534Q76KX8 674 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 OR2L2Q8NH16 312 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 SLC22A8Q8TCC7 542 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 JRKO75564 520 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 AOAHP28039 575 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 C6orf132Q5T0Z8 1188 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 Q8N402 240 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 TMIEQ8NEW7 156 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 ALOXE3Q9BYJ1 711 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 PADI2Q9Y2J8 665 aa17.24■□□□□ 0.35
COL18A1-204ENST00000400337 URB1O60287 2271 aaKnown RBP17.24■□□□□ 0.35
COL18A1-204ENST00000400337 VSTM2BA6NLU5 285 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 GABRR3A8MPY1 467 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 CDKN2CP42773 168 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 NCS1P62166 190 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 VEZF1Q14119 521 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 NKAPLQ5M9Q1 402 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 TMEM69Q5SWH9 247 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 CPZQ66K79 652 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 OR5D16Q8NGK9 328 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 ZNF480Q8WV37 535 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 DIO2Q92813 273 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 TOX2Q96NM4 488 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 LMAN1LQ9HAT1 526 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 PCGF2P35227 344 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 DPP6P42658 865 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 LRP8Q14114 963 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 IRF4Q15306 451 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 ZNF791Q3KP31 576 aaPredicted RBP17.23■□□□□ 0.35
COL18A1-204ENST00000400337 RUNDC3AQ59EK9 446 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 ACOT4Q8N9L9 421 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 LPAR4Q99677 370 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 ATG5Q9H1Y0 275 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 FANCFQ9NPI8 374 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 PCDHB16Q9NRJ7 776 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 DCAF13Q9NV06 445 aaKnown RBP17.23■□□□□ 0.35
COL18A1-204ENST00000400337 HSPB11Q9Y547 144 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 ENTPD2Q9Y5L3 495 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 ALS2Q96Q42 1657 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 SH3D21A4FU49 640 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 GALK2Q01415 458 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 MAP4K2Q12851 820 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 PRSS48Q7RTY5 328 aa17.23■□□□□ 0.35
COL18A1-204ENST00000400337 ASB11Q8WXH4 323 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms