RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SAR1AQ9NR31 198 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 CNOT11Q9UKZ1 510 aaKnown RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 B3GNT3Q9Y2A9 372 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 ARL2BPQ9Y2Y0 163 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 C7orf72A4D263 438 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 FAAHO00519 579 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 PRKRAO75569 313 aaKnown RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 ITGA10O75578 1167 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 NEURL1O76050 574 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 CRYABP02511 175 aaKnown RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 UFM1P61960 85 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 PHC1P78364 1004 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 PSG6Q00889 435 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 RBBP4Q09028 425 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 STX5Q13190 355 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 ELOAQ14241 798 aaKnown RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 KRT72Q14CN4 511 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 FAM174BQ3ZCQ3 159 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 ATP1A1-AS1Q5TC04 95 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 ZNF324BQ6AW86 544 aaPredicted RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 SHISA6Q6ZSJ9 500 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 CCDC116Q8IYX3 515 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 TMEM156Q8N614 296 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 ZFP62Q8NB50 900 aaPredicted RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 NUP43Q8NFH3 380 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 OR52R1Q8NGF1 315 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 OR8J3Q8NGG0 315 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 ZFP90Q8TF47 636 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 GTF2H4Q92759 462 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 RILPQ96NA2 401 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 SH3GL1Q99961 368 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 PAIP1Q9H074 479 aaKnown RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 PLSCR2Q9NRY7 297 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 DDX18Q9NVP1 670 aaKnown RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 NDE1Q9NXR1 346 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 SH3BP4Q9P0V3 963 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 MAP10Q9P2G4 905 aa6.95□□□□□ -1.3
USP16-204ENST00000399976 MARCOQ9UEW3 520 aaPredicted RBP6.95□□□□□ -1.3
USP16-204ENST00000399976 DSPPQ9NZW4 1301 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 NPIPB9F8W1W9 429 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 LINC01387J3KSC0 135 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 GLSO94925 669 aaPredicted RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 ALOX5P09917 674 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 KITP10721 976 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 CNR1P21554 472 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 RPS4Y1P22090 263 aaKnown RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 ELAVL4P26378 380 aaKnown RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 MSX1P28360 303 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 FEN1P39748 380 aaKnown RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 CCT3P49368 545 aaKnown RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 HBA1P69905 142 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 TP53BP2Q13625 1128 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 GANABQ14697 944 aaKnown RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 SPANXN4Q5MJ08 99 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 C8orf82Q6P1X6 216 aaPredicted RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 ZNF227Q86WZ6 799 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 MMP21Q8N119 569 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 KRTCAP2Q8N6L1 136 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 OR52N2Q8NGI0 321 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 ASB15Q8WXK1 588 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 EXTL1Q92935 676 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 TMCO6Q96DC7 493 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 COL21A1Q96P44 957 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 OR52E6Q96RD3 313 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 CCDC106Q9BWC9 280 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 OR8D2Q9GZM6 311 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 RASSF4Q9H2L5 321 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 CDCP1Q9H5V8 836 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 CXorf36Q9H7Y0 433 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 BCL2L10Q9HD36 194 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 A4GALTQ9NPC4 353 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 SACM1LQ9NTJ5 587 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 BAIAP2L1Q9UHR4 511 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 NPFFR2Q9Y5X5 522 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 PTPRQQ9UMZ3 2332 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 USP24Q9UPU5 2620 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 KIAA1549Q9HCM3 1950 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 A0A1B0GVC2 190 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 CCDC154A6NI56 674 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 KLRC4-KLRK1H3BQV0 150 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 ETV2O00321 342 aaPredicted RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 SH3BGRLO75368 114 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 TRIM3O75382 744 aaPredicted RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 KCNH1O95259 989 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 SP1P08047 785 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 SNRPB2P08579 225 aaKnown RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 GPX2P18283 190 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 TBXA2RP21731 343 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 MC3RP41968 323 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 CDK9P50750 372 aaKnown RBP6.94□□□□□ -1.3
USP16-204ENST00000399976 CCL11P51671 97 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 GNGT1P63211 74 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 ZNF141Q15928 474 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 MAPKAPK3Q16644 382 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 DECR1Q16698 335 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 SLC25A25Q6KCM7 469 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 FAM111BQ6SJ93 734 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 BEST3Q8N1M1 668 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 UCN3Q969E3 161 aa6.94□□□□□ -1.3
USP16-204ENST00000399976 C5orf34Q96MH7 638 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms