RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 IL20RAQ9UHF4 553 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 KCNE1BA0A087WTH5 132 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 DAPL1A0PJW8 107 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 WASHC1A8K0Z3 465 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 CLDN25C9JDP6 229 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 K7EQS6 105 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 AQP9O43315 295 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 EFEMP2O95967 443 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 CPMP14384 443 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 SLC9A3P48764 834 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 CHRNEQ04844 493 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 NSDHLQ15738 373 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 TMEM44Q2T9K0 475 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 FAM111BQ6SJ93 734 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 WASH2PQ6VEQ5 465 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 Q6ZPB1 254 aaPredicted RBP13.22□□□□□ -0.29
SCAF4-202ENST00000399804 METTL25Q8N6Q8 603 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 MSANTD3Q96H12 275 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 CRELD1Q96HD1 420 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 WDR12Q9GZL7 423 aaKnown RBP13.22□□□□□ -0.29
SCAF4-202ENST00000399804 SERHL2Q9H4I8 314 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 SERHLQ9NQF3 203 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 HSPE1-MOB4S4R3N1 261 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 PIKFYVEQ9Y2I7 2098 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 ATP6V1G1O75348 118 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 OXSR1O95747 527 aaPredicted RBP13.22□□□□□ -0.29
SCAF4-202ENST00000399804 DBIP07108 87 aaKnown RBP13.22□□□□□ -0.29
SCAF4-202ENST00000399804 CKMT1AP12532 417 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 MASP1P48740 699 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
SCAF4-202ENST00000399804 VBP1P61758 197 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 IQCF1Q8N6M8 205 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 ANKRD53Q8N9V6 530 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 ANKRA2Q9H9E1 313 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 PRPH2P23942 346 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 CXCR1P25024 350 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 PCSK6P29122 969 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 XCR1P46094 333 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 PRPF38BQ5VTL8 546 aaKnown RBP13.21□□□□□ -0.29
SCAF4-202ENST00000399804 NRMQ8IXM6 262 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 THAP3Q8WTV1 239 aaPredicted RBP13.21□□□□□ -0.29
SCAF4-202ENST00000399804 MAP3K3Q99759 626 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 SNTG1Q9NSN8 517 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 GPR83Q9NYM4 423 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 TNFRSF10DQ9UBN6 386 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 MGAMO43451 1857 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 A0A1W2PR48 441 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 HYKKA2RU49 373 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
SCAF4-202ENST00000399804 PRAMEF10O60809 474 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 PRAMEF4O60810 478 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 AK1P00568 194 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 MRPS15P82914 257 aaKnown RBP13.21□□□□□ -0.29
SCAF4-202ENST00000399804 LPAL2Q16609 132 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 PRAMEF9Q5VWM5 478 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF57Q68EA5 555 aaPredicted RBP13.21□□□□□ -0.29
SCAF4-202ENST00000399804 TMEM92Q6UXU6 159 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF420Q8TAQ5 688 aaPredicted RBP13.21□□□□□ -0.29
SCAF4-202ENST00000399804 RSC1A1Q92681 617 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 LRR1Q96L50 414 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 G6PC3Q9BUM1 346 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 SLITRK2Q9H156 845 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 WASH6PQ9NQA3 447 aa13.21□□□□□ -0.29
SCAF4-202ENST00000399804 KLK3P07288 261 aaPredicted RBP13.21□□□□□ -0.3
SCAF4-202ENST00000399804 FBLP22087 321 aaKnown RBP13.21□□□□□ -0.3
SCAF4-202ENST00000399804 ACVR2AP27037 513 aa13.21□□□□□ -0.3
SCAF4-202ENST00000399804 CCKBRP32239 447 aa13.21□□□□□ -0.3
SCAF4-202ENST00000399804 PROX2Q3B8N5 592 aa13.21□□□□□ -0.3
SCAF4-202ENST00000399804 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.3
SCAF4-202ENST00000399804 SLC48A1Q6P1K1 146 aa13.21□□□□□ -0.3
SCAF4-202ENST00000399804 COX14Q96I36 57 aa13.21□□□□□ -0.3
SCAF4-202ENST00000399804 FAM46AQ96IP4 442 aaKnown RBP13.21□□□□□ -0.3
SCAF4-202ENST00000399804 EPOPA6NHQ4 379 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 BLOC1S5-TXNDC5H3BN57 136 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 OSMP13725 252 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 CBLP22681 906 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 MYL9P24844 172 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 CD27P26842 260 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 BSGP35613 385 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 GCGRP47871 477 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 DAPP51397 102 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 TNFRSF17Q02223 184 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 ZNF550Q7Z398 422 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 OAFQ86UD1 273 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 COMMD2Q86X83 199 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 VRK2Q86Y07 508 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 CHDHQ8NE62 594 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 TMEM80Q96HE8 168 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 CNIH4Q9P003 139 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 RNF6Q9Y252 685 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 SIT1Q9Y3P8 196 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 TCRBV5S2A0A599 114 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 PRR23D1E9PI22 279 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 LOC110117498-PIK3R3F6TDL0 507 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 JRKO75564 520 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 PRR23D2P0DMB1 279 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-202ENST00000399804 DUSP7Q16829 419 aa13.2□□□□□ -0.3
SCAF4-202ENST00000399804 ZNF675Q8TD23 568 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms