RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 COX10Q12887 443 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 RIN1Q13671 783 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
APOB-202ENST00000399256 DUSP6Q16828 381 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 MINDY4Q4G0A6 757 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 KIAA1161Q6NSJ0 714 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 DPCDQ9BVM2 203 aaPredicted RBP13.18□□□□□ -0.3
APOB-202ENST00000399256 NUDT15Q9NV35 164 aa13.18□□□□□ -0.3
APOB-202ENST00000399256 A0A1W2PRQ8 180 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 SLC5A10A0PJK1 596 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 PRAMEF27A3QJZ7 478 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 ATG13O75143 517 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 HLA-DPB1P04440 258 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 HK1P19367 917 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 PTBP1P26599 531 aaKnown RBP eCLIP13.17□□□□□ -0.31e-323■■■■■ 46.8
APOB-202ENST00000399256 SSTR2P30874 369 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 SRP9P49458 86 aaKnown RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 CNTN1Q12860 1018 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 PLA1AQ53H76 456 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 TJAP1Q5JTD0 557 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 RAET1GQ6H3X3 334 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 KRT74Q7RTS7 529 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 DNAJB7Q7Z6W7 309 aaPredicted RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 NR2C2APQ86WQ0 139 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 IQCF2Q8IXL9 164 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 ZNF485Q8NCK3 441 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 TEX47Q8TBZ9 253 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 XAGE5Q8WWM1 108 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 EXOSC8Q96B26 276 aaKnown RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 THAP7Q9BT49 309 aaPredicted RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 SERHL2Q9H4I8 314 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 ZNF624Q9P2J8 865 aaPredicted RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 CKAP5Q14008 2032 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 GSAPA4D1B5 854 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 A8MUA0 341 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 SLC19A2O60779 497 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 C1orf105O95561 183 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 LATS1O95835 1130 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 RAF1P04049 648 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 URODP06132 367 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 CXCL3P19876 107 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 STOMP27105 288 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 CDH11P55287 796 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 RPA4Q13156 261 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 FGFBP1Q14512 234 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 RNASE12Q5GAN4 147 aaKnown RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 TMEM220Q6QAJ8 160 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 TMEM107Q6UX40 140 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 COMMD7Q86VX2 200 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 ADGRF3Q8IZF5 1079 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 CMTM8Q8IZV2 173 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 MORN4Q8NDC4 146 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 OR6T1Q8NGN1 323 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 SPRYD4Q8WW59 207 aaPredicted RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 RFT1Q96AA3 541 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 ENAMQ9NRM1 1142 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 MRPS18AQ9NVS2 196 aaKnown RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 SLCO1C1Q9NYB5 712 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 CNIH4Q9P003 139 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 TRPC4Q9UBN4 977 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 ZFR2Q9UPR6 939 aaKnown RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 ANAPC1Q9H1A4 1944 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 EEF1E1O43324 174 aaKnown RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 MMP20O60882 483 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 BTG1P62324 171 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 ZNF155Q12901 538 aaPredicted RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 POM121L1PQ3SYA9 428 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 TMEM91Q6ZNR0 172 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 KLBQ86Z14 1044 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 C7orf57Q8NEG2 295 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 SLC5A11Q8WWX8 675 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 ART5Q96L15 291 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 DEFB118Q96PH6 123 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 SECISBP2Q96T21 854 aaKnown RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 C17orf62Q9BQA9 187 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 ZSCAN5AQ9BUG6 496 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 IMP3Q9NV31 184 aaKnown RBP13.17□□□□□ -0.3
APOB-202ENST00000399256 PHF11Q9UIL8 331 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 ICKQ9UPZ9 632 aa13.17□□□□□ -0.3
APOB-202ENST00000399256 IRGMA1A4Y4 181 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 OR5K3A6NET4 321 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 EIF4EP06730 217 aaKnown RBP13.16□□□□□ -0.3
APOB-202ENST00000399256 TPOP07202 933 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 PTGER1P34995 402 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 PTGS2P35354 604 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 NDUFA9Q16795 377 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 C1orf94Q6P1W5 598 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 NXPE4Q6UWF7 544 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 CD300LDQ6UXZ3 194 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 SLC51BQ86UW2 128 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 BMPERQ8N8U9 685 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 OR5P2Q8WZ92 322 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 MARVELD3Q96A59 401 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 ACAT2Q9BWD1 397 aa13.16□□□□□ -0.3
APOB-202ENST00000399256 C1QTNF7Q9BXJ2 289 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms