RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 KLHL20Q9Y2M5 609 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 F5P12259 2224 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CYP7B1O75881 506 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 THBS1P07996 1170 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 C8orf89P0DMQ9 161 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CSTF2P33240 577 aaKnown RBP eCLIP16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 LIPAP38571 399 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GIPRP48546 466 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GSSP48637 474 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RGS6P49758 472 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SMSP52788 366 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 DUSP2Q05923 314 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 LARS2Q15031 903 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TMEM44Q2T9K0 475 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 EIPR1Q53HC9 387 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TUBA3EQ6PEY2 450 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 C19orf48Q6RUI8 117 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RBM45Q8IUH3 476 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 LACC1Q8IV20 430 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 FAM3CQ92520 227 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OTUB1Q96FW1 271 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 C16orf58Q96GQ5 468 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GPR27Q9NS67 375 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MAN2C1Q9NTJ4 1040 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 C19orf53Q9UNZ5 99 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SATB2Q9UPW6 733 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ATG2BQ96BY7 2078 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SPTY2D1-AS1A0A0U1RR47 76 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 M0R3H8 397 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PLOD3O60568 738 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CTSVO60911 334 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ZBTB11O95625 1053 aaPredicted RBP16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ATP1B1P05026 303 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GUSBP08236 651 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CPMP14384 443 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 POLR2CP19387 275 aaPredicted RBP16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 VBP1P61758 197 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CDK5Q00535 292 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ARMCX4Q5H9R4 360 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MFSD4BQ5TF39 518 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RRM2BQ7LG56 351 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ZER1Q7Z7L7 766 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MRGPREQ86SM8 312 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OOSP2Q86WS3 158 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PEX5LQ8IYB4 626 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MINDY2Q8NBR6 621 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR6Q1Q8NGQ2 317 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 B4GALNT2Q8NHY0 566 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TMEM80Q96HE8 168 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PIGUQ9H490 435 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SYNPO2LQ9H987 977 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 AMBNQ9NP70 447 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 AKIP1Q9NQ31 210 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 POLE3Q9NRF9 147 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ERGIC3Q9Y282 383 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CA5BQ9Y2D0 317 aa16.61■□□□□ 0.25
HLA-DQB1-204ENST00000399084 BLACEA4D250 179 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 AP3D1O14617 1153 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SCAMP1O15126 338 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MAN1A2O60476 641 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR5F1O95221 314 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 EPPINO95925 133 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 STATHP02808 62 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 POU3F3P20264 500 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MMP11P24347 488 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 BMP8BP34820 402 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TAS2R41P59536 307 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SKP1P63208 163 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TSPAN31Q12999 210 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 DUSP8Q13202 625 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RUNX2Q13950 521 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 DECR1Q16698 335 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ZNF750Q32MQ0 723 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 DEFB134Q4QY38 66 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 KLHL22Q53GT1 634 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TMEM236Q5W0B7 351 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR52P1PQ8NH57 321 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 NDNFQ8TB73 568 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CHPT1Q8WUD6 406 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 JPH3Q8WXH2 748 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SLC35A4Q96G79 324 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 COX4I2Q96KJ9 171 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 STACQ99469 402 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 YIPF4Q9BSR8 244 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 DCSTAMPQ9H295 470 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 KRCC1Q9NPI7 259 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 DUSP22Q9NRW4 184 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 FAIMQ9NVQ4 179 aa16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MRPS18AQ9NVS2 196 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB1-204ENST00000399084 H0YGG7 62 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 FOXD2O60548 495 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PFDN1O60925 122 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 IGHV4-34P06331 123 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CCNYL3P0C7X3 344 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OPRL1P41146 370 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PCYT1AP49585 367 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 NUDT6P53370 316 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ARF3P61204 181 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 EFNB1P98172 346 aa16.59■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CHRNEQ04844 493 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms