RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SPRTNQ9H040 489 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 TRPM5Q9NZQ8 1165 aa9.33□□□□□ -0.92
PTCHD4-202ENST00000398738 FAM183AA6NL82 134 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 RNASET2O00584 256 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 PROS1P07225 676 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 MMP11P24347 488 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 SERPINA4P29622 427 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 PCBP4P57723 403 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 RGS1Q08116 209 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 MGAT3Q09327 533 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 EXOSC2Q13868 293 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 GALEQ14376 348 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 SYPL1Q16563 259 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 ZNF630Q2M218 657 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 LIPJQ5W064 366 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 RETSATQ6NUM9 610 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 ZER1Q7Z7L7 766 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 ARL14EPQ8N8R7 260 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 ZBTB44Q8NCP5 570 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 ATF6BQ99941 703 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 MARVELD1Q9BSK0 173 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 THAP7Q9BT49 309 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 MS4A7Q9GZW8 240 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 SLAMF7Q9NQ25 335 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 STOX2Q9P2F5 926 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 RWDD3Q9Y3V2 267 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 CDH10Q9Y6N8 788 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 ANKRD36A6QL64 1941 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 TSPAN6O43657 245 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC43A1O75387 559 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 DHFRP00374 187 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 CPEP16870 476 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 STOMP27105 288 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 GIFP27352 417 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 NUDT1P36639 197 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 TALDO1P37837 337 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 MTNR1AP48039 350 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 AP1S1P61966 158 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 SNRPGP62308 76 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 CNTN1Q12860 1018 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 ADAM15Q13444 863 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 SF3A2Q15428 464 aaKnown RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 KLHL12Q53G59 568 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 MED27Q6P2C8 311 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 TMEM65Q6PI78 240 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 ESPNLQ6ZVH7 1005 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 RAET1EQ8TD07 263 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 C16orf78Q8WTQ4 265 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 SMAP2Q8WU79 429 aaPredicted RBP9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 HMGB4Q8WW32 186 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 ZFPM2Q8WW38 1151 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 FBXW2Q9UKT8 454 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 MYO16Q9Y6X6 1858 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 PTPRDP23468 1912 aa9.32□□□□□ -0.92
PTCHD4-202ENST00000398738 TRBV5-4A0A0C4DH59 114 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 GABRPO00591 440 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 SHOXO15266 292 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 PROM1O43490 865 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 DPM1O60762 260 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 ARHGEF15O94989 841 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 PIPP12273 146 aaPredicted RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 M6PRP20645 277 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 TXNDC8Q6A555 127 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 TIGD3Q6B0B8 471 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC30A6Q6NXT4 461 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 SYT9Q86SS6 491 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 IZUMO1Q8IYV9 350 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 CPA6Q8N4T0 437 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 BBS10Q8TAM1 723 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 CHTF18Q8WVB6 975 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 ASZ1Q8WWH4 475 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 KLK6Q92876 244 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 FCRL4Q96PJ5 515 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 SPNS1Q9H2V7 528 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 IMP3Q9NV31 184 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 B4GALT6Q9UBX8 382 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 MGAT4BQ9UQ53 548 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 HTTP42858 3142 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 A0A0B4J203 849 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 TEX13CA0A0J9YWL9 993 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 ZC3H12DA2A288 527 aaKnown RBP9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 GLOD5A6NK44 160 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 ASGR1P07306 291 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 FURINP09958 794 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 CBSLP0DN79 551 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 ARAFP10398 606 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 NR2F1P10589 423 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 PRKACAP17612 351 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 PRPH2P23942 346 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 PSMA3P25788 255 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 VIPR1P32241 457 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 CBSP35520 551 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 LIMS1P48059 325 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 HMGA2P52926 109 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 CTSCP53634 463 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 OR10A3P58181 314 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 GPR17Q13304 367 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 FAM110CQ1W6H9 321 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 LYPLAL1Q5VWZ2 237 aa9.31□□□□□ -0.92
PTCHD4-202ENST00000398738 RRM2BQ7LG56 351 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms