RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 CLHC1Q8NHS4 586 aa13.14□□□□□ -0.31
HDDC2-202ENST00000398153 SPPL2AQ8TCT8 520 aa13.14□□□□□ -0.31
HDDC2-202ENST00000398153 C1orf50Q9BV19 199 aa13.14□□□□□ -0.31
HDDC2-202ENST00000398153 NUF2Q9BZD4 464 aa13.14□□□□□ -0.31
HDDC2-202ENST00000398153 BHLHE41Q9C0J9 482 aaPredicted RBP13.14□□□□□ -0.31
HDDC2-202ENST00000398153 C3orf14Q9HBI5 128 aa13.14□□□□□ -0.31
HDDC2-202ENST00000398153 DEPPQ9NTK1 212 aa13.14□□□□□ -0.31
HDDC2-202ENST00000398153 PNPOQ9NVS9 261 aa13.14□□□□□ -0.31
HDDC2-202ENST00000398153 QPCTLQ9NXS2 382 aa13.14□□□□□ -0.31
HDDC2-202ENST00000398153 BOKQ9UMX3 212 aaPredicted RBP13.14□□□□□ -0.31
HDDC2-202ENST00000398153 A0A1B0GUH1 482 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 NPIPA5E9PKD4 350 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 GLSO94925 669 aaPredicted RBP13.13□□□□□ -0.31
HDDC2-202ENST00000398153 PTGER1P34995 402 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 GPC1P35052 558 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 KRT20P35900 424 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 PNLIPRP2P54317 469 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 PPP2R2AP63151 447 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 PLCXD2Q0VAA5 305 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 DPY19L1Q2PZI1 675 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 VPS26BQ4G0F5 336 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 ZNF385BQ569K4 471 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 SPATA19Q7Z5L4 167 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 SIMC1Q8NDZ2 872 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 OR10G3Q8NGC4 313 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 PSMA8Q8TAA3 256 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 DIO2Q92813 273 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 TMCO6Q96DC7 493 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 OMA1Q96E52 524 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 SLC35A4Q96G79 324 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 C7orf26Q96N11 449 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 ANGPTL4Q9BY76 406 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 TTTY12Q9BZ98 90 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 ZDHHC11Q9H8X9 412 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 FOLH1BQ9HBA9 442 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 NEUROD4Q9HD90 331 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 GIMAP2Q9UG22 337 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 MRTO4Q9UKD2 239 aaKnown RBP13.13□□□□□ -0.31
HDDC2-202ENST00000398153 CNOT11Q9UKZ1 510 aaKnown RBP13.13□□□□□ -0.31
HDDC2-202ENST00000398153 NPIPA1Q9UND3 350 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 SLC5A6Q9Y289 635 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.13□□□□□ -0.31
HDDC2-202ENST00000398153 RELNP78509 3460 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 POLEQ07864 2286 aa13.13□□□□□ -0.31
HDDC2-202ENST00000398153 A0A1W2PRB8 838 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 EMC8O43402 210 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 TGDSO95455 350 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 CLNS1AP54105 237 aaKnown RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 PSMD4P55036 377 aaKnown RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 CASP6P55212 293 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 PER3P56645 1201 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 FBXW4P57775 412 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 PPIAP62937 165 aaKnown RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 KCNJ2P63252 427 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 PRR5P85299 388 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 PSG6Q00889 435 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 PLGLB1Q02325 96 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 FOXO1Q12778 655 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 HSPB3Q12988 150 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 EFR3AQ14156 821 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 C4orf17Q53FE4 359 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 RNFT1Q5M7Z0 435 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 TMEM198Q66K66 360 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 ANKRD26P1Q6NSI1 321 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 SLC30A6Q6NXT4 461 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 Q6ZPB1 254 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 ZNF551Q7Z340 670 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 FAM109AQ8N4B1 249 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 CDRT4Q8N9R6 151 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 VPS37AQ8NEZ2 397 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 OR7A2PQ8NGA2 310 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 OR8J2Q8NGG1 315 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 LRRC8CQ8TDW0 803 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 DYDC1Q8WWB3 177 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 OR5P2Q8WZ92 322 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 HOXB13Q92826 284 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 RELTQ969Z4 430 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 CIDECQ96AQ7 238 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 TESCQ96BS2 214 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 MOAP1Q96BY2 351 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 NTNG2Q96CW9 530 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 DTNBP1Q96EV8 351 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 MAELQ96JY0 434 aaKnown RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 LMF2Q9BU23 707 aaKnown RBP13.12□□□□□ -0.31
HDDC2-202ENST00000398153 DOHHQ9BU89 302 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 Q9N2J8 555 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 ZFP64Q9NPA5 681 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 B4GALT7Q9UBV7 327 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 ZNF835Q9Y2P0 537 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 EXPH5Q8NEV8 1989 aa13.12□□□□□ -0.31
HDDC2-202ENST00000398153 SDHDO14521 159 aa13.11□□□□□ -0.31
HDDC2-202ENST00000398153 TRIM3O75382 744 aaPredicted RBP13.11□□□□□ -0.31
HDDC2-202ENST00000398153 LAMP1P11279 417 aa13.11□□□□□ -0.31
HDDC2-202ENST00000398153 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
HDDC2-202ENST00000398153 PIGAP37287 484 aa13.11□□□□□ -0.31
HDDC2-202ENST00000398153 CASP3P42574 277 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms