RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ACSL6Q9UKU0 697 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 MAP4K5Q9Y4K4 846 aa13.96□□□□□ -0.17
CAPN3-207ENST00000397200 A0A1W2PR48 441 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 PDPK1O15530 556 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 SUV39H1O43463 412 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 AHCYL1O43865 530 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 E2F6O75461 281 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 AIFM1O95831 613 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 NR2F6P10588 404 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 DRD2P14416 443 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 CRATP43155 626 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 XCR1P46094 333 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 ALDH9A1P49189 494 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 HLCSP50747 726 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 RAD23AP54725 363 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 SELENOWP63302 87 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 KCNAB2Q13303 367 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 IL18R1Q13478 541 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 SCARB2Q14108 478 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 ZIK1Q3SY52 487 aaPredicted RBP13.95□□□□□ -0.18
CAPN3-207ENST00000397200 CRB2Q5IJ48 1285 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 C18orf63Q68DL7 685 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 ALDH16A1Q8IZ83 802 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 GALNT6Q8NCL4 622 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 SLC46A1Q96NT5 459 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 MUS81Q96NY9 551 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 NRSN2Q9GZP1 204 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 SIRT3Q9NTG7 399 aaPredicted RBP13.95□□□□□ -0.18
CAPN3-207ENST00000397200 ACSS1Q9NUB1 689 aaPredicted RBP13.95□□□□□ -0.18
CAPN3-207ENST00000397200 DDX18Q9NVP1 670 aaKnown RBP13.95□□□□□ -0.18
CAPN3-207ENST00000397200 MRPS33Q9Y291 106 aaKnown RBP13.95□□□□□ -0.18
CAPN3-207ENST00000397200 COMMD3-BMI1R4GMX3 469 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 SCN2AQ99250 2005 aa13.95□□□□□ -0.18
CAPN3-207ENST00000397200 E9PQ18 207 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 DLGAP3O95886 979 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 PIGAP37287 484 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 ID4P47928 161 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 ANKRD34AQ69YU3 496 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 KDM4DQ6B0I6 523 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 C6orf15Q6UXA7 325 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-207ENST00000397200 TSEN54Q7Z6J9 526 aaKnown RBP13.94□□□□□ -0.18
CAPN3-207ENST00000397200 THAP5Q7Z6K1 395 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 RNF130Q86XS8 419 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 FBLIM1Q8WUP2 373 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 MR1Q95460 341 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 TAMM41Q96BW9 452 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 CSF3RQ99062 836 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 EPYCQ99645 322 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 RBCK1Q9BYM8 510 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 MKKSQ9NPJ1 570 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-207ENST00000397200 THSD1Q9NS62 852 aa13.94□□□□□ -0.18
CAPN3-207ENST00000397200 TEX51A0A1B0GUA7 166 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 hCG_2039718K7EN88 272 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 CYR61O00622 381 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 HS6ST1O60243 411 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 PRKRAO75569 313 aaKnown RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 ONECUT2O95948 504 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 CCNYL3P0C7X3 344 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 GSTT1P30711 240 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 SLC5A2P31639 672 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 CHI3L1P36222 383 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 RPS6KA3P51812 740 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 CDH15P55291 814 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 CDK6Q00534 326 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 RBM48Q5RL73 367 aaKnown RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 ZNF691Q5VV52 312 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 FAHD1Q6P587 224 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 IGF2-ASQ6U949 168 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 COX15Q7KZN9 410 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 C8orf59Q8N0T1 100 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 SHISA5Q8N114 240 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 ZNF555Q8NEP9 628 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 OR5AK3PQ8NH89 298 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 NFKBIDQ8NI38 313 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 OR1F2PQ96R84 312 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 BARD1Q99728 777 aaKnown RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 A4GALTQ9NPC4 353 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 SLC22A11Q9NSA0 550 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 GPN3Q9UHW5 284 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 CEPT1Q9Y6K0 416 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 SDK2Q58EX2 2172 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 NUP210LQ5VU65 1888 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 BLACEA4D250 179 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 GLOD5A6NK44 160 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 C9J4A7 227 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 FAM227AF5H4B4 570 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 FHP07954 510 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 IGFBP5P24593 272 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 SOAT1P35610 550 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 DSTNP60981 165 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 OCA2Q04671 838 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 PPP1R8Q12972 351 aaKnown RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 CAMK2BQ13554 666 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 OVCH1Q7RTY7 1134 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 CYP4Z1Q86W10 505 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 ZC3H7AQ8IWR0 971 aaKnown RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 PIK3C3Q8NEB9 887 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 ZFAND2BQ8WV99 257 aa13.93□□□□□ -0.18
CAPN3-207ENST00000397200 HDAC2Q92769 488 aaKnown RBP13.93□□□□□ -0.18
CAPN3-207ENST00000397200 FKBP10Q96AY3 582 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms