RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 GYG2O15488 501 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 RGS14O43566 566 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 HS6ST1O60243 411 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 BCAS2O75934 225 aaPredicted RBP13.42□□□□□ -0.26
SEC13-208ENST00000397109 S1PR1P21453 382 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 TMED10P49755 219 aaKnown RBP13.42□□□□□ -0.26
SEC13-208ENST00000397109 NR0B1P51843 470 aaKnown RBP13.42□□□□□ -0.26
SEC13-208ENST00000397109 NRG3P56975 720 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 PPIAP62937 165 aaKnown RBP13.42□□□□□ -0.26
SEC13-208ENST00000397109 PAOXQ6QHF9 649 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 LYPD8Q6UX82 237 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 MAMDC2Q7Z304 686 aaPredicted RBP13.42□□□□□ -0.26
SEC13-208ENST00000397109 SLC22A16Q86VW1 577 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 PAQR8Q8TEZ7 354 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 CNRIP1Q96F85 164 aaPredicted RBP13.42□□□□□ -0.26
SEC13-208ENST00000397109 EBPLQ9BY08 206 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 SLC35C2Q9NQQ7 365 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 MAT2BQ9NZL9 334 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 ZNF639Q9UID6 485 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 ENTPD4Q9Y227 616 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 DNAJC13O75165 2243 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 CCL21O00585 134 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 PIP5K1BO14986 540 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 CCL3P10147 92 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 ABOP16442 354 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 MPIP34949 423 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 RFC3P40938 356 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 KCNJ2P63252 427 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 C2orf80Q0P641 193 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 MGAT2Q10469 447 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 NTRK2Q16620 822 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 SLC9B1Q4ZJI4 515 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 NOXRED1Q6NXP6 359 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 FAM111BQ6SJ93 734 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 Q6ZSR9 355 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 FAM13CQ8NE31 585 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 ZNF675Q8TD23 568 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 ADIPOR1Q96A54 375 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 EXOSC8Q96B26 276 aaKnown RBP13.42□□□□□ -0.26
SEC13-208ENST00000397109 CTHRC1Q96CG8 243 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 IL1RL2Q9HB29 575 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 SH2D2AQ9NP31 389 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 MYNNQ9NPC7 610 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 TAS2R1Q9NYW7 299 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 PRODH2Q9UF12 536 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 BCAP29Q9UHQ4 241 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 FIS1Q9Y3D6 152 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 NPFFR2Q9Y5X5 522 aa13.42□□□□□ -0.26
SEC13-208ENST00000397109 ZNF407Q9C0G0 2248 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 NINQ8N4C6 2090 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 PRRG2O14669 202 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 TP53I11O14683 189 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 GSC2O15499 205 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 ZG16O60844 167 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 SEC22BO75396 215 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 JUNP05412 331 aaKnown RBP13.41□□□□□ -0.26
SEC13-208ENST00000397109 NCF2P19878 526 aaPredicted RBP13.41□□□□□ -0.26
SEC13-208ENST00000397109 DDCP20711 480 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 DCAF7P61962 342 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 RPP38P78345 283 aaKnown RBP13.41□□□□□ -0.26
SEC13-208ENST00000397109 C3AR1Q16581 482 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 HYAL4Q2M3T9 481 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 LSM12Q3MHD2 195 aaKnown RBP13.41□□□□□ -0.26
SEC13-208ENST00000397109 CMPK2Q5EBM0 449 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 TBCELQ5QJ74 424 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 FAM71E1Q6IPT2 247 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 TREML1Q86YW5 311 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 CCDC116Q8IYX3 515 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 EID3Q8N140 333 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 FBXW8Q8N3Y1 598 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 ADCY4Q8NFM4 1077 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 OR2T11Q8NH01 316 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 RP9Q8TA86 221 aaKnown RBP13.41□□□□□ -0.26
SEC13-208ENST00000397109 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.41□□□□□ -0.263e-65■■■■■ 27.1
SEC13-208ENST00000397109 BBS4Q96RK4 519 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 TTTY12Q9BZ98 90 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 LRTM1Q9HBL6 345 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 MIEF1Q9NQG6 463 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 C1orf109Q9NX04 203 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 TAS2R7Q9NYW3 318 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 PTGDR2Q9Y5Y4 395 aa13.41□□□□□ -0.26
SEC13-208ENST00000397109 A1L4Q6 167 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 PINLYPA6NC86 204 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 ANKRD33BA6NCL7 494 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 B2RBV5 119 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 G3V3Y1 287 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 LSM1O15116 133 aaKnown RBP13.4□□□□□ -0.26
SEC13-208ENST00000397109 ACOX3O15254 700 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 CDC40O60508 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC13-208ENST00000397109 SKAP2O75563 359 aaPredicted RBP13.4□□□□□ -0.26
SEC13-208ENST00000397109 GLSO94925 669 aaPredicted RBP13.4□□□□□ -0.26
SEC13-208ENST00000397109 KRT16P08779 473 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 LINC00032P0C843 101 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 NAGAP17050 411 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 GPX3P22352 226 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 PTGER1P34995 402 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 PTGS2P35354 604 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 DUSP2Q05923 314 aa13.4□□□□□ -0.26
SEC13-208ENST00000397109 EXOSC7Q15024 291 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms