RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 NUDT4Q9NZJ9 180 aa13.51□□□□□ -0.25
SEC13-206ENST00000397102 HEY2Q9UBP5 337 aa13.51□□□□□ -0.25
SEC13-206ENST00000397102 PCDHGA11Q9Y5H2 935 aa13.51□□□□□ -0.25
SEC13-206ENST00000397102 A0A087X1B8 175 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 FRG2CA6NGY1 282 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 HS3ST1O14792 307 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 KLF4O43474 513 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 CD5LO43866 347 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 CPMP14384 443 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 EPB42P16452 691 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 TBXA2RP21731 343 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 IVDP26440 423 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 XKP51811 444 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 HMGCS1Q01581 520 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 ETFDHQ16134 617 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 ANKRD34AQ69YU3 496 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 MILR1Q7Z6M3 343 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 MYLK4Q86YV6 388 aaPredicted RBP13.5□□□□□ -0.25
SEC13-206ENST00000397102 ANKMY2Q8IV38 441 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 GBP7Q8N8V2 638 aaPredicted RBP13.5□□□□□ -0.25
SEC13-206ENST00000397102 ZNF610Q8N9Z0 462 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 UBXN10Q96LJ8 280 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 REG4Q9BYZ8 158 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 PSD3Q9NYI0 1048 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 EHD3Q9NZN3 535 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 DKKL1Q9UK85 242 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 FBXL2Q9UKC9 423 aa13.5□□□□□ -0.25
SEC13-206ENST00000397102 MTO1Q9Y2Z2 717 aaKnown RBP13.5□□□□□ -0.25
SEC13-206ENST00000397102 GOLGA6L6A8MZA4 724 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 H0YIV9 168 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 THBDP07204 575 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 PEPDP12955 493 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 PPP3CBP16298 524 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 PORP16435 677 aaPredicted RBP13.49□□□□□ -0.25
SEC13-206ENST00000397102 STMN1P16949 149 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 ARL4CP56559 192 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 RPS4XP62701 263 aaKnown RBP13.49□□□□□ -0.25
SEC13-206ENST00000397102 C10orf62Q5T681 223 aaPredicted RBP13.49□□□□□ -0.25
SEC13-206ENST00000397102 LIPJQ5W064 366 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 STAG3L4Q8TBR4 150 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 ACTRT1Q8TDG2 376 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 FIG4Q92562 907 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 REPS1Q96D71 796 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 TMCO6Q96DC7 493 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 TMEM204Q9BSN7 226 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 KLHL4Q9C0H6 718 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 RNF122Q9H9V4 155 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 YAE1D1Q9NRH1 226 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 BCAP29Q9UHQ4 241 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 PROCRQ9UNN8 238 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 JRKLQ9Y4A0 524 aa13.49□□□□□ -0.25
SEC13-206ENST00000397102 OR6C70A6NIJ9 312 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 EFCAB8A8MWE9 144 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 PHF1O43189 567 aaPredicted RBP13.48□□□□□ -0.25
SEC13-206ENST00000397102 ZIC3O60481 467 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 ABCB7O75027 752 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 TNFRSF21O75509 655 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 PLAUP00749 431 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 GBAP04062 536 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 DPP4P27487 766 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 IDUAP35475 653 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 EEFSECP57772 596 aaKnown RBP13.48□□□□□ -0.25
SEC13-206ENST00000397102 B3GALT5-AS1P59052 145 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 MAP4K2Q12851 820 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 ZKSCAN8Q15776 578 aaPredicted RBP13.48□□□□□ -0.25
SEC13-206ENST00000397102 PRICKLE4Q2TBC4 344 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 CHRFAM7AQ494W8 412 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 UBQLNLQ8IYU4 475 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 FBXO36Q8NEA4 188 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 TRMT61AQ96FX7 289 aaKnown RBP13.48□□□□□ -0.25
SEC13-206ENST00000397102 GPR22Q99680 433 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 BRINP2Q9C0B6 783 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 DDX47Q9H0S4 455 aaKnown RBP13.48□□□□□ -0.25
SEC13-206ENST00000397102 ALG9Q9H6U8 611 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 MAT2BQ9NZL9 334 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 ZNF639Q9UID6 485 aa13.48□□□□□ -0.25
SEC13-206ENST00000397102 SUPT3HB4E1H0 165 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 TO15178 435 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 SUPT3HO75486 399 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 SEMA3DO95025 777 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 ATP1B1P05026 303 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 DRD5P21918 477 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 TCEA1P23193 301 aaKnown RBP13.47□□□□□ -0.25
SEC13-206ENST00000397102 PPICP45877 212 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 MGAT2Q10469 447 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 FASTKD3Q14CZ7 662 aaKnown RBP13.47□□□□□ -0.25
SEC13-206ENST00000397102 EXOSC7Q15024 291 aaKnown RBP13.47□□□□□ -0.25
SEC13-206ENST00000397102 GUSBP1Q15486 140 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 FAM111BQ6SJ93 734 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 ISCA2Q86U28 154 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 TEX9Q8N6V9 391 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 ADCY4Q8NFM4 1077 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 SLC35A4Q96G79 324 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 PLPPR2Q96GM1 343 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 COL21A1Q96P44 957 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 ATOH8Q96SQ7 321 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 LRRC1Q9BTT6 524 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 PINK1Q9BXM7 581 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 SMYD2Q9NRG4 433 aa13.47□□□□□ -0.25
SEC13-206ENST00000397102 PRODH2Q9UF12 536 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms