RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PTGER1P34995 402 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 POLR2JP52435 117 aaKnown RBP12.65□□□□□ -0.38
SEC13-205ENST00000397101 SLC26A5P58743 744 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 NDUFAF5Q5TEU4 345 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 C18orf63Q68DL7 685 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 MRM1Q6IN84 353 aaKnown RBP12.65□□□□□ -0.38
SEC13-205ENST00000397101 FAM71E1Q6IPT2 247 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 ARHGAP11AQ6P4F7 1023 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 GK5Q6ZS86 529 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 TRPM8Q7Z2W7 1104 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 ZNF227Q86WZ6 799 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 ARMC10Q8N2F6 343 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 KRTCAP2Q8N6L1 136 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 OR9I1Q8NGQ6 314 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 TMEM125Q96AQ2 219 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 PPCDCQ96CD2 204 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 C11orf24Q96F05 449 aaPredicted RBP12.65□□□□□ -0.38
SEC13-205ENST00000397101 OR1F2PQ96R84 312 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 RBCK1Q9BYM8 510 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 MYLK2Q9H1R3 596 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 CDCP1Q9H5V8 836 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 REEP4Q9H6H4 257 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 CLK4Q9HAZ1 481 aaKnown RBP12.65□□□□□ -0.38
SEC13-205ENST00000397101 SDR39U1Q9NRG7 319 aaPredicted RBP12.65□□□□□ -0.38
SEC13-205ENST00000397101 TEX10Q9NXF1 929 aaPredicted RBP12.65□□□□□ -0.38
SEC13-205ENST00000397101 PSME2Q9UL46 239 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 EDARQ9UNE0 448 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 RPH3AQ9Y2J0 694 aaPredicted RBP12.65□□□□□ -0.38
SEC13-205ENST00000397101 KLF13Q9Y2Y9 288 aaPredicted RBP12.65□□□□□ -0.38
SEC13-205ENST00000397101 ATG4BQ9Y4P1 393 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 ASB4Q9Y574 426 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 HRH3Q9Y5N1 445 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 ABCA4P78363 2273 aa12.65□□□□□ -0.38
SEC13-205ENST00000397101 LOC100653049A0A140TA62 436 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 A0A1B0GTH9 108 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 A0A1W2PR48 441 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 C1orf226A1L170 272 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 FAM234BA2RU67 622 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 NKX2-6A6NCS4 301 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 CCDC154A6NI56 674 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 GLOD5A6NK44 160 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 KLRC4-KLRK1H3BQV0 150 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 EBAG9O00559 213 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 SCAMP2O15127 329 aaKnown RBP12.64□□□□□ -0.39
SEC13-205ENST00000397101 ZNHIT1O43257 154 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 PROM1O43490 865 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 PRMT3O60678 531 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 B4GALT2O60909 372 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 PRKRAO75569 313 aaKnown RBP12.64□□□□□ -0.39
SEC13-205ENST00000397101 ERAL1O75616 437 aaKnown RBP12.64□□□□□ -0.39
SEC13-205ENST00000397101 KRT34O76011 436 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 AIFM1O95831 613 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 ADSLP30566 484 aaPredicted RBP12.64□□□□□ -0.39
SEC13-205ENST00000397101 S100A3P33764 101 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 RHAGQ02094 409 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 TNFRSF17Q02223 184 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 NSDHLQ15738 373 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 MMEL1Q495T6 779 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 SFT2D3Q587I9 215 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 CPTPQ5TA50 214 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 ZNF468Q5VIY5 522 aaPredicted RBP12.64□□□□□ -0.39
SEC13-205ENST00000397101 ANKRD26P1Q6NSI1 321 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 CLNKQ7Z7G1 428 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 GLB1L3Q8NCI6 653 aaPredicted RBP12.64□□□□□ -0.39
SEC13-205ENST00000397101 OR7A2PQ8NGA2 310 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 EXOSC8Q96B26 276 aaKnown RBP12.64□□□□□ -0.39
SEC13-205ENST00000397101 CCDC106Q9BWC9 280 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 UCK2Q9BZX2 261 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 ZNF385DQ9H6B1 395 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 RPF2Q9H7B2 306 aaKnown RBP12.64□□□□□ -0.39
SEC13-205ENST00000397101 CCM2LQ9NUG4 571 aaPredicted RBP12.64□□□□□ -0.39
SEC13-205ENST00000397101 GIMAP4Q9NUV9 329 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 ATAD3AQ9NVI7 634 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 ST6GALNAC2Q9UJ37 374 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 PCDHA9Q9Y5H5 950 aa12.64□□□□□ -0.39
SEC13-205ENST00000397101 ACANP16112 2415 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 CCT8L1PA6NM43 557 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 FAM90A27PA6NNH2 459 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 CLDN4O14493 209 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 TFECO14948 347 aaPredicted RBP12.63□□□□□ -0.39
SEC13-205ENST00000397101 SLC22A2O15244 555 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 CTAG2O75638 210 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 DDCP20711 480 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 JAK1P23458 1154 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 HLCSP50747 726 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 MLF1P58340 268 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 FOXD4Q12950 439 aaPredicted RBP12.63□□□□□ -0.39
SEC13-205ENST00000397101 MYBPHQ13203 477 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 CYLC2Q14093 348 aaPredicted RBP12.63□□□□□ -0.39
SEC13-205ENST00000397101 CMPK2Q5EBM0 449 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 SNX32Q86XE0 403 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 FITM2Q8N6M3 262 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 ZFP62Q8NB50 900 aaPredicted RBP12.63□□□□□ -0.39
SEC13-205ENST00000397101 TBC1D20Q96BZ9 403 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 KLHL29Q96CT2 875 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 CMTM5Q96DZ9 223 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 MTERF3Q96E29 417 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 TEX37Q96LM6 180 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 ALPK1Q96QP1 1244 aa12.63□□□□□ -0.39
SEC13-205ENST00000397101 BBS4Q96RK4 519 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms