RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 C10orf53Q8N6V4 93 aa8□□□□□ -1.13
NDE1-202ENST00000396355 DNAAF1Q8NEP3 725 aa8□□□□□ -1.13
NDE1-202ENST00000396355 OR10G2Q8NGC3 310 aa8□□□□□ -1.13
NDE1-202ENST00000396355 OR10D4PQ8NGN7 298 aa8□□□□□ -1.13
NDE1-202ENST00000396355 KIAA1143Q96AT1 154 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 WDCPQ9H6R7 721 aa8□□□□□ -1.13
NDE1-202ENST00000396355 MEAF6Q9HAF1 191 aa8□□□□□ -1.13
NDE1-202ENST00000396355 LYARQ9NX58 379 aaKnown RBP8□□□□□ -1.13
NDE1-202ENST00000396355 ZNF230Q9UIE0 474 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 Q9Y3F1 56 aa8□□□□□ -1.13
NDE1-202ENST00000396355 NYNRINQ9P2P1 1898 aaKnown RBP8□□□□□ -1.13
NDE1-202ENST00000396355 K7EPK0 472 aa8□□□□□ -1.13
NDE1-202ENST00000396355 PRAMEF2O60811 474 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SCGNO76038 276 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SNAPINO95295 136 aa8□□□□□ -1.13
NDE1-202ENST00000396355 AHSGP02765 367 aa8□□□□□ -1.13
NDE1-202ENST00000396355 DNAJA1P31689 397 aaKnown RBP8□□□□□ -1.13
NDE1-202ENST00000396355 PPM1FP49593 454 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 CSRP3P50461 194 aa8□□□□□ -1.13
NDE1-202ENST00000396355 XKR4Q5GH76 650 aa8□□□□□ -1.13
NDE1-202ENST00000396355 AADACL4Q5VUY2 407 aa8□□□□□ -1.13
NDE1-202ENST00000396355 GSG1LQ6UXU4 331 aa8□□□□□ -1.13
NDE1-202ENST00000396355 BHLHA9Q7RTU4 235 aa8□□□□□ -1.13
NDE1-202ENST00000396355 LHFPL3Q86UP9 236 aa8□□□□□ -1.13
NDE1-202ENST00000396355 FAM71E2Q8N5Q1 922 aa8□□□□□ -1.13
NDE1-202ENST00000396355 UBAC2Q8NBM4 344 aa8□□□□□ -1.13
NDE1-202ENST00000396355 ACBD4Q8NC06 268 aa8□□□□□ -1.13
NDE1-202ENST00000396355 NEIL3Q8TAT5 605 aa8□□□□□ -1.13
NDE1-202ENST00000396355 NXPE3Q969Y0 559 aa8□□□□□ -1.13
NDE1-202ENST00000396355 RAB3CQ96E17 227 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SLC2A13Q96QE2 648 aa8□□□□□ -1.13
NDE1-202ENST00000396355 TEFMQ96QE5 360 aaKnown RBP8□□□□□ -1.13
NDE1-202ENST00000396355 DUSP16Q9BY84 665 aa8□□□□□ -1.13
NDE1-202ENST00000396355 TOLLIPQ9H0E2 274 aa8□□□□□ -1.13
NDE1-202ENST00000396355 TUBB1Q9H4B7 451 aa8□□□□□ -1.13
NDE1-202ENST00000396355 RGCCQ9H4X1 137 aa8□□□□□ -1.13
NDE1-202ENST00000396355 MRPL22Q9NWU5 206 aaKnown RBP8□□□□□ -1.13
NDE1-202ENST00000396355 VAPAQ9P0L0 249 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SAMD4AQ9UPU9 718 aaKnown RBP8□□□□□ -1.13
NDE1-202ENST00000396355 H3BSH0 61 aa8□□□□□ -1.13
NDE1-202ENST00000396355 OR7A17O14581 309 aa8□□□□□ -1.13
NDE1-202ENST00000396355 FADS1O60427 444 aa8□□□□□ -1.13
NDE1-202ENST00000396355 HTR1AP08908 422 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SMIM10L2AP0DMW4 78 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SMIM10L2BP0DMW5 78 aa8□□□□□ -1.13
NDE1-202ENST00000396355 HSD17B1P14061 328 aa8□□□□□ -1.13
NDE1-202ENST00000396355 POU3F2P20265 443 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 TNFRSF1BP20333 461 aa8□□□□□ -1.13
NDE1-202ENST00000396355 HLA-DMAP28067 261 aa8□□□□□ -1.13
NDE1-202ENST00000396355 NTSP30990 170 aa8□□□□□ -1.13
NDE1-202ENST00000396355 VEGFCP49767 419 aa8□□□□□ -1.13
NDE1-202ENST00000396355 RIDAP52758 137 aaKnown RBP8□□□□□ -1.13
NDE1-202ENST00000396355 KIAA0141Q14154 515 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 CPSF6Q16630 551 aaKnown RBP eCLIP8□□□□□ -1.13
NDE1-202ENST00000396355 LEXMQ3ZCV2 418 aa8□□□□□ -1.13
NDE1-202ENST00000396355 GTDC1Q4AE62 458 aa8□□□□□ -1.13
NDE1-202ENST00000396355 PYCR3Q53H96 274 aa8□□□□□ -1.13
NDE1-202ENST00000396355 WSCD1Q658N2 575 aa8□□□□□ -1.13
NDE1-202ENST00000396355 GDF6Q6KF10 455 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 SLC46A3Q7Z3Q1 461 aa8□□□□□ -1.13
NDE1-202ENST00000396355 PXT1Q8NFP0 134 aa8□□□□□ -1.13
NDE1-202ENST00000396355 OR10R2Q8NGX6 335 aa8□□□□□ -1.13
NDE1-202ENST00000396355 LINGO1Q96FE5 620 aa8□□□□□ -1.13
NDE1-202ENST00000396355 HSPA12BQ96MM6 686 aa8□□□□□ -1.13
NDE1-202ENST00000396355 CNTNAP3BQ96NU0 1288 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SLC38A2Q96QD8 506 aa8□□□□□ -1.13
NDE1-202ENST00000396355 THAP7Q9BT49 309 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 TMEM43Q9BTV4 400 aa8□□□□□ -1.13
NDE1-202ENST00000396355 IL22Q9GZX6 179 aa8□□□□□ -1.13
NDE1-202ENST00000396355 CRTAC1Q9NQ79 661 aa8□□□□□ -1.13
NDE1-202ENST00000396355 ACSS1Q9NUB1 689 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 TDP1Q9NUW8 608 aa8□□□□□ -1.13
NDE1-202ENST00000396355 RPS6KA6Q9UK32 745 aa8□□□□□ -1.13
NDE1-202ENST00000396355 URGCP-MRPS24S4R325 110 aa8□□□□□ -1.13
NDE1-202ENST00000396355 TLX2O43763 284 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 SFTPCP11686 197 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 GDI1P31150 447 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 NOS2P35228 1153 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 UGT2B10P36537 528 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 WDR5P61964 334 aaKnown RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 ZNF155Q12901 538 aaPredicted RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 IRF3Q14653 427 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 P2RY14Q15391 338 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SLC5A12Q1EHB4 618 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 C14orf28Q4W4Y0 310 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 LGI4Q8N135 537 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 TCEANCQ8N8B7 351 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 TMEM145Q8NBT3 493 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SPATA22Q8NHS9 363 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 SLC13A3Q8WWT9 602 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 LPPQ93052 612 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 TMEM125Q96AQ2 219 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 FEVQ99581 238 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 DPH7Q9BTV6 452 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 GPATCH2Q9NW75 528 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 ACSL6Q9UKU0 697 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 RUVBL1Q9Y265 456 aaKnown RBP7.99□□□□□ -1.13
NDE1-202ENST00000396355 NRCAMQ92823 1304 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 TMEM72A0PK05 275 aa7.99□□□□□ -1.13
NDE1-202ENST00000396355 MBLAC1A4D2B0 266 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms