RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TMEM89A2RUT3 159 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 VWC2LB2RUY7 222 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 CCDC188H7C350 402 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 H2AFYO75367 372 aaKnown RBP12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 PRKRAO75569 313 aaKnown RBP12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 AQP8O94778 261 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 CD3EP07766 207 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 CD22P20273 847 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 USF1P22415 310 aaPredicted RBP12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 MAGEA6P43360 314 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 NRG3P56975 720 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 IL2P60568 153 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 RPS13P62277 151 aaKnown RBP12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 BASP1P80723 227 aaKnown RBP12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 CDKL1Q00532 357 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 TGM3Q08188 693 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 C18orf63Q68DL7 685 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 NUP54Q7Z3B4 507 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 PLCZ1Q86YW0 608 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 CREG2Q8IUH2 290 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 KRT78Q8N1N4 520 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 AGGF1Q8N302 714 aaeCLIP12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 CCDC89Q8N998 374 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 C2CD4AQ8NCU7 369 aaPredicted RBP12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 OR6K3Q8NGY3 331 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 RNF138Q8WVD3 245 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 WDR34Q96EX3 536 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 VPS39Q96JC1 886 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 NXF5Q9H1B4 397 aaKnown RBP12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 CXorf21Q9HAI6 301 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 ARGLU1Q9NWB6 273 aaPredicted RBP12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 SPACA6W5XKT8 324 aa12.22□□□□□ -0.45
VCPKMT-201ENST00000395859 LOC100289279A0A1B0GTE1 492 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 SHISA9B4DS77 424 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 VENTXO95231 258 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 GPR75O95800 540 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 CT62P0C5K7 136 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 PEPDP12955 493 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 HNF1AP20823 631 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 S1PR1P21453 382 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 GPX3P22352 226 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 GDF5P43026 501 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 HMGCS1Q01581 520 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 TNFRSF17Q02223 184 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 E2F2Q14209 437 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 C18orf21Q32NC0 220 aaPredicted RBP12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 C4orf22Q6V702 233 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 GPSM1Q86YR5 675 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 SRFBP1Q8NEF9 429 aaKnown RBP12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 MAIP1Q8WWC4 291 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 PINK1Q9BXM7 581 aa12.21□□□□□ -0.45
VCPKMT-201ENST00000395859 A0A1W2PS29 197 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 MAGEB16A2A368 324 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 DPRXA6NFQ7 191 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 PRAMEF25A6NGN4 478 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 DLX3O60479 287 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 UGT2B11O75310 529 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 SLC35E2BP0CK96 405 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 SLC35E2P0CK97 266 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 CNTFP26441 200 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 ADH6P28332 368 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 HNRNPH2P55795 449 aaKnown RBP12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 SNX1Q13596 522 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 PON3Q15166 354 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 PDCD2Q16342 344 aaPredicted RBP12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 CTU2Q2VPK5 515 aaKnown RBP12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 MMGT1Q8N4V1 131 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 METTL25Q8N6Q8 603 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 CALML6Q8TD86 181 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 ZNF473Q8WTR7 871 aaKnown RBP12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 FAM168AQ92567 244 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 S100PBPQ96BU1 408 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 PKNOX2Q96KN3 472 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 SERPINB12Q96P63 405 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 HBEGFQ99075 208 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 SORBS1Q9BX66 1292 aaKnown RBP12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 CACNG6Q9BXT2 260 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 OR10A5Q9H207 317 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 C12orf65Q9H3J6 166 aaKnown RBP12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 ALG2Q9H553 416 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 ZNF696Q9H7X3 374 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 MS4A12Q9NXJ0 267 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 CISD1Q9NZ45 108 aaKnown RBP12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 GPRC5BQ9NZH0 403 aa12.2□□□□□ -0.46
VCPKMT-201ENST00000395859 PGRMC1O00264 195 aaKnown RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 RAMP1O60894 148 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 SS18L1O75177 396 aaPredicted RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 GCM2O75603 506 aaPredicted RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 WDR47O94967 919 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 CASP2P42575 452 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 HNMTP50135 292 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 GAS1P54826 345 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 BSPH1Q075Z2 132 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 SLAMF1Q13291 335 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 TAB1Q15750 504 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 CCNG2Q16589 344 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 KCTD19Q17RG1 926 aaPredicted RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms