RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 J3QRE1 110 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 KPNA4O00629 521 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-202ENST00000394888 LAMP2P13473 410 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 POU1F1P28069 291 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 GDI1P31150 447 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 MAT2AP31153 395 aaKnown RBP14.42□□□□□ -0.1
CPSF7-202ENST00000394888 TNFRSF4P43489 277 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 GIPRP48546 466 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 ZNF136P52737 540 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 SLC9A5Q14940 896 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 SHHQ15465 462 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 PRAMEF8Q5VWM4 474 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 PRAMEF7Q5VXH5 474 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 PHC2Q8IXK0 858 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 OR4Q3Q8NH05 313 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 WDR36Q8NI36 951 aaKnown RBP14.42□□□□□ -0.1
CPSF7-202ENST00000394888 TSSK6Q9BXA6 273 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 PINK1Q9BXM7 581 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 MCOLN1Q9GZU1 580 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 POLR2J3Q9H1A7 115 aaKnown RBP14.42□□□□□ -0.1
CPSF7-202ENST00000394888 CTPS2Q9NRF8 586 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 SACM1LQ9NTJ5 587 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 LALBAP00709 142 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 SSTR4P31391 388 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 MEDAGQ5VYS4 303 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 TUBA3EQ6PEY2 450 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 WDR88Q6ZMY6 472 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 PHPT1Q9NRX4 125 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-202ENST00000394888 CLN6Q9NWW5 311 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 DIMT1Q9UNQ2 313 aaKnown RBP14.42□□□□□ -0.1
CPSF7-202ENST00000394888 CACNA1IQ9P0X4 2223 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 TNFSF14O43557 240 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 MAP3K8P41279 467 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 TSFMP43897 325 aaKnown RBP14.42□□□□□ -0.1
CPSF7-202ENST00000394888 KHKP50053 298 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 HOXC5Q00444 222 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 RUNX2Q13950 521 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 MED22Q15528 200 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 ZNF776Q68DI1 518 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-202ENST00000394888 ANKRD54Q6NXT1 300 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 DNAJC5GQ8N7S2 189 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 MINDY2Q8NBR6 621 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 TTLQ8NG68 377 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 ZNF607Q96SK3 696 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 IRAK4Q9NWZ3 460 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 CARD8Q9Y2G2 431 aa14.42□□□□□ -0.1
CPSF7-202ENST00000394888 YARS2Q9Y2Z4 477 aaKnown RBP14.42□□□□□ -0.1
CPSF7-202ENST00000394888 TMEM221A6NGB7 291 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 C5orf58C9J3I9 102 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 EGFP01133 1207 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 APODP05090 189 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 HOXC4P09017 264 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-202ENST00000394888 PCYT1AP49585 367 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 SELENBP1Q13228 472 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 SPDYE7PQ495Y7 208 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 ZMAT1Q5H9K5 638 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 PRSS41Q7RTY9 318 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 OR8J1Q8NGP2 316 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 PRSS27Q9BQR3 290 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 TRMT61BQ9BVS5 477 aaKnown RBP14.41□□□□□ -0.1
CPSF7-202ENST00000394888 MIR1-1HGQ9H1L0 117 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 A0A0G2JPF8 293 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 HNRNPCL2B2RXH8 293 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 HNRNPCL3B7ZW38 293 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 HCRTR1O43613 425 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 ASNA1O43681 348 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 ZNF888P0CJ79 500 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-202ENST00000394888 HNRNPCL4P0DMR1 293 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 RPS4Y1P22090 263 aaKnown RBP14.41□□□□□ -0.1
CPSF7-202ENST00000394888 MAGEA8P43361 318 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 ABATP80404 500 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 BNC1Q01954 994 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 DBPQ10586 325 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-202ENST00000394888 ZNF155Q12901 538 aaPredicted RBP14.41□□□□□ -0.1
CPSF7-202ENST00000394888 TRIM16LQ309B1 348 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 NKAIN4Q8IVV8 208 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 FAM181AQ8N9Y4 354 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 TMEM80Q96HE8 168 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 MIXL1Q9H2W2 232 aa14.41□□□□□ -0.1
CPSF7-202ENST00000394888 PRR23AA6NEV1 266 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 KDM4EB2RXH2 506 aaPredicted RBP14.4□□□□□ -0.1
CPSF7-202ENST00000394888 CASC3O15234 703 aaKnown RBP14.4□□□□□ -0.1
CPSF7-202ENST00000394888 SERPIND1P05546 499 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 FHP07954 510 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 ZGLP1P0C6A0 271 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 MAP4K2Q12851 820 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 ITPRIPL2Q3MIP1 535 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 TYW3Q6IPR3 259 aaKnown RBP14.4□□□□□ -0.1
CPSF7-202ENST00000394888 RBM12BQ8IXT5 1001 aaKnown RBP14.4□□□□□ -0.1
CPSF7-202ENST00000394888 SLC16A11Q8NCK7 471 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 RASSF5Q8WWW0 418 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 KAT2AQ92830 837 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 NELL2Q99435 816 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 TP53BP1Q12888 1972 aaPredicted RBP14.4□□□□□ -0.1
CPSF7-202ENST00000394888 HYKKA2RU49 373 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 CDC42EP2O14613 210 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 PIP5K1CO60331 668 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 UGT2B17O75795 530 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 HSMCR30P0CW71 290 aa14.4□□□□□ -0.1
CPSF7-202ENST00000394888 NR2F1P10589 423 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms