RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SFXN2Q96NB2 322 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 MUS81Q96NY9 551 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 SLC12A9Q9BXP2 914 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF175Q9Y473 711 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 HPRP00739 348 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 CD79AP11912 226 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 PYCR1P32322 319 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 CRISP1P54107 249 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 TLE3Q04726 772 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 KCNAB2Q13303 367 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 RAB6CQ53S08 254 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM135Q86UB9 458 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 TP53INP2Q8IXH6 220 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 OR4K13Q8NH42 304 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 PHOSPHO2Q8TCD6 241 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 RBM24Q9BX46 236 aaKnown RBP9.87□□□□□ -0.83
COL4A6-203ENST00000394872 RAB6CQ9H0N0 254 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 FMO6PO60774 539 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 PROZP22891 400 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 APLNRP35414 380 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 EMP2P54851 167 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 MPP2Q14168 576 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 DTX3Q8N9I9 347 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 RCBTB1Q8NDN9 531 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM185BQ9H7F4 350 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 C5AR2Q9P296 337 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 CLCN2P51788 898 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 SHISA6Q6ZSJ9 500 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 SLC5A8Q8N695 610 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 FAM46BQ96A09 425 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 MYRFLQ96LU7 910 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 DUSP23Q9BVJ7 150 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 ENTPD2Q9Y5L3 495 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 OR52A4PA6NMU1 304 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 H3BML4 177 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 RAC2P15153 192 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 TNFRSF4P43489 277 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF551Q7Z340 670 aaPredicted RBP9.86□□□□□ -0.83
COL4A6-203ENST00000394872 VTCN1Q7Z7D3 282 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 CHCHD4Q8N4Q1 142 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 LSM14AQ8ND56 463 aaKnown RBP9.86□□□□□ -0.83
COL4A6-203ENST00000394872 OR2T4Q8NH00 348 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 C7orf43Q8WVR3 580 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 CIDECQ96AQ7 238 aaPredicted RBP9.86□□□□□ -0.83
COL4A6-203ENST00000394872 APIPQ96GX9 242 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF778Q96MU6 729 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 BORCS7-ASMTA0A0B4J1R7 106 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 MEN1O00255 615 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 FBP2O00757 339 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 PLGLAQ15195 96 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 RPS26P11Q5JNZ5 115 aaPredicted RBP9.86□□□□□ -0.83
COL4A6-203ENST00000394872 TAS1R1Q7RTX1 841 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 ANKLE1Q8NAG6 615 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 FUBP1Q96AE4 644 aaKnown RBP9.86□□□□□ -0.83
COL4A6-203ENST00000394872 MS4A4EQ96PG1 132 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 EMC3Q9P0I2 261 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 EFR3AQ14156 821 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 RBM39Q14498 530 aaKnown RBP9.86□□□□□ -0.83
COL4A6-203ENST00000394872 PRAMEF8Q5VWM4 474 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 PRAMEF7Q5VXH5 474 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 ZBTB8BQ8NAP8 495 aaPredicted RBP9.86□□□□□ -0.83
COL4A6-203ENST00000394872 OR9A2Q8NGT5 310 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 FGF13Q92913 245 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 LRR1Q96L50 414 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 USB1Q9BQ65 265 aaKnown RBP9.86□□□□□ -0.83
COL4A6-203ENST00000394872 MAGIXQ9H6Y5 334 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 MYNNQ9NPC7 610 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 COPZ2Q9P299 210 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 IFNA5P01569 189 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 CSF2P04141 144 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 GNAO1P09471 354 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 ZXDBP98169 803 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 PIGFQ07326 219 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 MELKQ14680 651 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 IRF4Q15306 451 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM201Q5SNT2 666 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 STEAP4Q687X5 459 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 AWAT2Q6E213 333 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 C22orf42Q6IC83 251 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 C15orf39Q6ZRI6 1047 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF619Q8N2I2 560 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 OR52N2Q8NGI0 321 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 SPTSSAQ969W0 71 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 PCTPQ9UKL6 214 aa9.86□□□□□ -0.83
COL4A6-203ENST00000394872 RDH16O75452 317 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 RP2O75695 350 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 FESP07332 822 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 MAOBP27338 520 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 CD6P30203 668 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 SOX9P48436 509 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 TUBB3Q13509 450 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 BLOC1S3Q6QNY0 202 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 BAIAP2L2Q6UXY1 529 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 DPPA4Q7L190 304 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 PDZD3Q86UT5 571 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 KLF16Q9BXK1 252 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-203ENST00000394872 LRP6O75581 1613 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 TRAPPC13A5PLN9 417 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 PPP1R3DO95685 299 aa9.85□□□□□ -0.83
COL4A6-203ENST00000394872 TUBG1P23258 451 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms