RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 NDUFV2P19404 249 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 ITGB7P26010 798 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 CCR4P51679 360 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 PCDH1Q08174 1060 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNF155Q12901 538 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TOMM5Q8N4H5 51 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 SAMD12Q8N8I0 201 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TCEAL4Q96EI5 215 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 RAD9AQ99638 391 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 PINK1Q9BXM7 581 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 MCUBQ9NWR8 336 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 PIKFYVEQ9Y2I7 2098 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TRBV23OR9-2A0A075B6M9 112 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 NPIPB8E9PQR5 432 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 HMGN2P05204 90 aaKnown RBP11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 EN2P19622 333 aaPredicted RBP11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 SKP1P63208 163 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 C3orf38Q5JPI3 329 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 SLC30A6Q6NXT4 461 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 PAMR1Q6UXH9 720 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 LAS2Q8IYD9 372 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 IZUMO1Q8IYV9 350 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNF433Q8N7K0 673 aaPredicted RBP11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 TMEM163Q8TC26 289 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 TM9SF2Q99805 663 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 CUEDC1Q9NWM3 386 aaPredicted RBP11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 TAAR2Q9P1P5 351 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 PPIL1Q9Y3C6 166 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 MYO7AQ13402 2215 aa11.02□□□□□ -0.64
UBE2D3-209ENST00000394804 SLC35F4A4IF30 521 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 ARRDC5A6NEK1 342 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 AGAP14A8MT82 685 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 J3QLW9 94 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 ASGR2P07307 311 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 ZNF19P17023 458 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 ZNF3P17036 446 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 STOMP27105 288 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 TAS2R43P59537 309 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 MAP4K2Q12851 820 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 PGBD2Q6P3X8 592 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 FAM124AQ86V42 546 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 MEX3DQ86XN8 651 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 NRROSQ86YC3 692 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 PLPP6Q8IY26 295 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 KLHDC8AQ8IYD2 350 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 LYARQ9NX58 379 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 DNMT3BQ9UBC3 853 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 OR10H1Q9Y4A9 318 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 SCN2BO60939 215 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 GNSP15586 552 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 PTPN6P29350 595 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 BMP8BP34820 402 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 RAB28P51157 221 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 IFITM3Q01628 133 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 PLK5Q496M5 336 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 BCDIN3DQ7Z5W3 292 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 BMP8AQ7Z5Y6 402 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 CADM2Q8N3J6 435 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 FANK1Q8TC84 345 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 OPALINQ96PE5 141 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 MS4A8Q9BY19 250 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 ABCG5Q9H222 651 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 SRMSQ9H3Y6 488 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 INSL6Q9Y581 213 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 MN1Q10571 1320 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 WASH3PC4AMC7 463 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 AXIN1O15169 862 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 FRS3O43559 492 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 RCVRNP35243 200 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 PSPHP78330 225 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 NTHL1P78549 312 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 DEFB103AP81534 67 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 OCLNQ16625 522 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 LHX8Q68G74 356 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 LAIR2Q6ISS4 152 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 NRMQ8IXM6 262 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 NANOGP1Q8N7R0 232 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 FBLIM1Q8WUP2 373 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 MED31Q9Y3C7 131 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 N6AMT1Q9Y5N5 214 aa11.02□□□□□ -0.65
UBE2D3-209ENST00000394804 UBE2QL1A1L167 161 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 SLC31A1O15431 190 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 ARL6IP5O75915 188 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 GBX2P52951 348 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 AP3S2P59780 193 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 NKX3-2P78367 333 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 RAE1P78406 368 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 MINDY4Q4G0A6 757 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 RTL4Q6ZR62 310 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 FAM83HQ6ZRV2 1179 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 GET4Q7L5D6 327 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 PHC2Q8IXK0 858 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 UBQLNLQ8IYU4 475 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 MEIOBQ8N635 442 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 FBXO15Q8NCQ5 510 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 OR52I1Q8NGK6 324 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 GOT1L1Q8NHS2 421 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 SLC7A13Q8TCU3 470 aa11.01□□□□□ -0.65
UBE2D3-209ENST00000394804 PITHD1Q9GZP4 211 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms