RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 HSD3B1P14060 373 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 GNSP15586 552 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 ZNF250P15622 560 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 ZNF14P17017 642 aaPredicted RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 ZNF3P17036 446 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 HSD3B2P26439 372 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 MAOBP27338 520 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 S100A2P29034 98 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 UGT2B10P36537 528 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 BUD31P41223 144 aaPredicted RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 MAN2A2P49641 1150 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 CAPZA1P52907 286 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 GBX2P52951 348 aaPredicted RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 ARFIP1P53367 373 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 CXCR4P61073 352 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 TEKQ02763 1124 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 FGL1Q08830 312 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 MAD2L1BPQ15013 274 aaPredicted RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 SSX2Q16385 188 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 AANATQ16613 207 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 NDUFA9Q16795 377 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 PAN3Q58A45 887 aaKnown RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 PRSS36Q5K4E3 855 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 LIPKQ5VXJ0 399 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 C22orf42Q6IC83 251 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 NUDT13Q86X67 352 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 ZSWIM9Q86XI8 627 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 FAM129CQ86XR2 697 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 C12orf45Q8N5I9 185 aaPredicted RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 EXOSC8Q96B26 276 aaKnown RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 ELMOD3Q96FG2 381 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 ST6GAL2Q96JF0 529 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 SPOCK3Q9BQ16 436 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 GALNT9Q9HCQ5 603 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 FZD3Q9NPG1 666 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 NANSQ9NR45 359 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 AIG1Q9NVV5 245 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 GPRC5BQ9NZH0 403 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 FBXW2Q9UKT8 454 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 COPS3Q9UNS2 423 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 NEU3Q9UQ49 428 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 MRPS33Q9Y291 106 aaKnown RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 SHROOM3Q8TF72 1996 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 ZNF98A6NK75 572 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 GPR89AB7ZAQ6 455 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 NARSO43776 548 aaKnown RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 ZNF217O75362 1048 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 PPM1BO75688 479 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 WDPCPO95876 746 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 GPR89BP0CG08 455 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 ARSBP15848 533 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 ZNF8P17098 575 aaPredicted RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 HNRNPA2B1P22626 353 aaKnown RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 ACSL1P33121 698 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 LIPAP38571 399 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 PRLHRP49683 370 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 CDK3Q00526 305 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 HYAL1Q12794 435 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 NTRK2Q16620 822 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 PAGE3Q5JUK9 113 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 CXXC5Q7LFL8 322 aaKnown RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 ZFAND4Q86XD8 727 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 LAX1Q8IWV1 398 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 GPALPP1Q8IXQ4 340 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 OR5T2Q8NGG2 359 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 OR2L2Q8NH16 312 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 KAT2AQ92830 837 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 UFD1Q92890 307 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 HLA-CQ95604 372 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 RFT1Q96AA3 541 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 LMLNQ96KR4 655 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 GPR78Q96P69 363 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 USB1Q9BQ65 265 aaKnown RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 SEC22CQ9BRL7 303 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 FAM117AQ9C073 453 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 SLIRPQ9GZT3 109 aaKnown RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 P2RY12Q9H244 342 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 OR51B5Q9H339 312 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 LTB4R2Q9NPC1 389 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 NUDT15Q9NV35 164 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 EXTL2Q9UBQ6 330 aa5.4□□□□□ -1.55
RFFL-202ENST00000394597 ZNF282Q9UDV7 671 aaPredicted RBP5.4□□□□□ -1.55
RFFL-202ENST00000394597 WDR81Q562E7 1941 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 TEX13CA0A0J9YWL9 993 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 C17orf113A0A1B0GUU1 675 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 A0A1W2PRB8 838 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 OR5K4A6NMS3 321 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 CLCA1A8K7I4 914 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 LEUTXA8MZ59 168 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 H7BY64 318 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 SHOXO15266 292 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 PROM1O43490 865 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 OR10H2O60403 315 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 MRPS14O60783 128 aaKnown RBP5.39□□□□□ -1.55
RFFL-202ENST00000394597 SLC16A8O95907 504 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 TCF3P15923 654 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 GPX3P22352 226 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 ENPP1P22413 925 aa5.39□□□□□ -1.55
RFFL-202ENST00000394597 CHMP24386 653 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms