RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 KHDRBS2Q5VWX1 349 aaKnown RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 NIPAL3Q6P499 406 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SLC23A3Q6PIS1 610 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ZNF730Q6ZMV8 503 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TSEN54Q7Z6J9 526 aaKnown RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SLC38A2Q96QD8 506 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CTRCQ99895 268 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 MRPL37Q9BZE1 423 aaKnown RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 SLA2Q9H6Q3 261 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CLK4Q9HAZ1 481 aaKnown RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 ZFP14Q9HCL3 533 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TCAF1Q9Y4C2 921 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TMEM94Q12767 1356 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ARHGAP31Q2M1Z3 1444 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 NRXN3Q9Y4C0 1643 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CYP27B1O15528 508 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SCO2O43819 266 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 KCNJ13O60928 360 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 DFFBO76075 338 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SNAP29O95721 258 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 UBTFL1P0CB47 393 aaPredicted RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 ARR3P36575 388 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 PLA2G16P53816 162 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ISL1P61371 349 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CX3CL1P78423 397 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 DLX2Q07687 328 aaPredicted RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 DSC1Q08554 894 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 HYAL1Q12794 435 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SPHARQ15513 63 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TIGD2Q4W5G0 525 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SLC27A4Q6P1M0 643 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CBLN3Q6UW01 205 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CLIP4Q8N3C7 705 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 OR6S1Q8NH40 331 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 FRG2BQ96QU4 278 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 OR5B12Q96R08 314 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 GANQ9H2C0 597 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SEC61A2Q9H9S3 476 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 RBAKQ9NYW8 714 aaPredicted RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 VANGL2Q9ULK5 521 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SLC7A7Q9UM01 511 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 DIMT1Q9UNQ2 313 aaKnown RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 SH2B3Q9UQQ2 575 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 FER1L4A9Z1Z3 1794 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SPATA31A3Q5VYP0 1347 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TRAV26-1A0A087WT03 109 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 A0A1W2PS29 197 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RNASET2O00584 256 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 GIMD1P0DJR0 217 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CYP19A1P11511 503 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 SSTR4P31391 388 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PPP3CCP48454 512 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 TNFSF10P50591 281 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ARHGDIBP52566 201 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ERVK-8P63133 956 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ZNF91Q05481 1191 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 GGTA1PQ4G0N0 100 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 EFHC1Q5JVL4 640 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 FAM71F2Q6NXP2 309 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 Q6ZTK2 550 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SLC16A14Q7RTX9 510 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 AMIGO2Q86SJ2 522 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 TMPRSS12Q86WS5 348 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SFTPA1Q8IWL2 248 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ALLCQ8N6M5 410 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 FAM86B1Q8N7N1 296 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MAGEC3Q8TD91 643 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CSF3RQ99062 836 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RHOJQ9H4E5 214 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 Q9H521 79 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 LYARQ9NX58 379 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 CTSFQ9UBX1 484 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CIDEBQ9UHD4 219 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 STON1Q9Y6Q2 735 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 INO80Q9ULG1 1556 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 OXSR1O95747 527 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 APOEP02649 317 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PNMA6AP0CW24 399 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 CDH5P33151 784 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 RFC2P35250 354 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ZNF33AQ06730 810 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 FAM102AQ5T9C2 384 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 KIAA0895LQ68EN5 471 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 GPSM1Q86YR5 675 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 BBS7Q8IWZ6 715 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 KLHL36Q8N4N3 616 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ACOT4Q8N9L9 421 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 OR4K14Q8NGD5 310 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 OR51G2Q8NGK0 314 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SMPDL3BQ92485 455 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 OSTF1Q92882 214 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RAB1CQ92928 201 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 HAUS1Q96CS2 278 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ZNF333Q96JL9 665 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 TSC22D3Q99576 134 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 RNF26Q9BY78 433 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 SLITRK2Q9H156 845 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PPIL3Q9H2H8 161 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 FAM124BQ9H5Z6 455 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms