RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 PSME2Q9UL46 239 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 ANKHD1Q8IWZ3 2542 aaKnown RBP15.12■□□□□ 0.01
PTPRK-208ENST00000392449 GNG14A0A1W2PPG7 69 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 FAM47E-STBD1D6RA91 191 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 UBFD1O14562 309 aaKnown RBP15.11■□□□□ 0.01
PTPRK-208ENST00000392449 SNPHO15079 494 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 ULK1O75385 1050 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 RHOXF2BP0C7M4 288 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 IMPDH1P20839 514 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 TCEA1P23193 301 aaKnown RBP15.11■□□□□ 0.01
PTPRK-208ENST00000392449 ATP5F1P24539 256 aaPredicted RBP15.11■□□□□ 0.01
PTPRK-208ENST00000392449 DNAJA1P31689 397 aaKnown RBP15.11■□□□□ 0.01
PTPRK-208ENST00000392449 SLCO1A2P46721 670 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 PRKAA2P54646 552 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 TRA2BP62995 288 aaKnown RBP15.11■□□□□ 0.01
PTPRK-208ENST00000392449 RPP38P78345 283 aaKnown RBP15.11■□□□□ 0.01
PTPRK-208ENST00000392449 LGSNQ5TDP6 509 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 SPNS3Q6ZMD2 512 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 LACC1Q8IV20 430 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 WDSUB1Q8N9V3 476 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 C16orf78Q8WTQ4 265 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 ABTB1Q969K4 478 aaPredicted RBP15.11■□□□□ 0.01
PTPRK-208ENST00000392449 MTBPQ96DY7 904 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 HSPBAP1Q96EW2 488 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 RHOXF2Q9BQY4 288 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 GSTO2Q9H4Y5 243 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 RYDENQ9NUL5 291 aaKnown RBP15.11■□□□□ 0.01
PTPRK-208ENST00000392449 DNAJB12Q9NXW2 375 aaKnown RBP15.11■□□□□ 0.01
PTPRK-208ENST00000392449 EMCNQ9ULC0 261 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 CFL2Q9Y281 166 aa15.11■□□□□ 0.01
PTPRK-208ENST00000392449 A0A1W2PPM1 405 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 PRAMEF25A6NGN4 478 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 FRG2CA6NGY1 282 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 B4DXG7 233 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 DVL2O14641 736 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 ACOX3O15254 700 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 CTAG2O75638 210 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 HSD3B1P14060 373 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 NAGAP17050 411 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 DRD5P21918 477 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 HSD3B2P26439 372 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 TIMP3P35625 211 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 KIR2DL3P43628 341 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 PPICP45877 212 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 ART1P52961 327 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 SLC29A2Q14542 456 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 NHSL2Q5HYW2 709 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 NSUN5P2Q63ZY6 315 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 OR5M10Q6IEU7 315 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 NPSR1Q6W5P4 371 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 TRMT10CQ7L0Y3 403 aaKnown RBP15.1■□□□□ 0.01
PTPRK-208ENST00000392449 NUP54Q7Z3B4 507 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 PM20D2Q8IYS1 436 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 C9orf106Q8NAJ2 232 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 LRRN4CLQ8ND94 238 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 CDC26Q8NHZ8 85 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 MZB1Q8WU39 189 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 ADOQ96SZ5 270 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 PRODH2Q9UF12 536 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 FBXL2Q9UKC9 423 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 GPR55Q9Y2T6 319 aaPredicted RBP15.1■□□□□ 0.01
PTPRK-208ENST00000392449 C2CD3Q4AC94 2353 aa15.1■□□□□ 0.01
PTPRK-208ENST00000392449 SYT5O00445 386 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 REM1O75628 298 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 IL2RAP01589 272 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 CT45A8P0DMV1 189 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 CT45A9P0DMV2 189 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 TIA1P31483 386 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTPRK-208ENST00000392449 ASCL1P50553 236 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 IST1P53990 364 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 SRYQ05066 204 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 ACSM2AQ08AH3 577 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 LCP2Q13094 533 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 CT45A2Q5DJT8 189 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 ACSM2BQ68CK6 577 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 SLC30A6Q6NXT4 461 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 CCNYL1Q8N7R7 359 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 OR7G2Q8NG99 324 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 OR4N2Q8NGD1 307 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 ZNF675Q8TD23 568 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 L3HYPDHQ96EM0 354 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 TUBA1CQ9BQE3 449 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 POLDIP3Q9BY77 421 aaKnown RBP15.09■□□□□ 0.01
PTPRK-208ENST00000392449 TXLNGYQ9BZA5 131 aa15.09■□□□□ 0.01
PTPRK-208ENST00000392449 C12orf65Q9H3J6 166 aaKnown RBP15.09■□□□□ 0.01
PTPRK-208ENST00000392449 MPDZO75970 2070 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 ZNF469Q96JG9 3925 aaPredicted RBP15.08■□□□□ 0.01
PTPRK-208ENST00000392449 TO15178 435 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 STARP49675 285 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 FOXF2Q12947 444 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 SPIN4Q56A73 249 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 TMEM81Q6P7N7 255 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 IFT20Q8IY31 132 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 OR14L1PQ8NHC6 308 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 RNASE6Q93091 150 aaKnown RBP15.08■□□□□ 0.01
PTPRK-208ENST00000392449 EFHD2Q96C19 240 aaPredicted RBP15.08■□□□□ 0.01
PTPRK-208ENST00000392449 C11orf24Q96F05 449 aaPredicted RBP15.08■□□□□ 0.01
PTPRK-208ENST00000392449 VSTM2LQ96N03 204 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 COL21A1Q96P44 957 aa15.08■□□□□ 0.01
PTPRK-208ENST00000392449 BTBD9Q96Q07 612 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms