RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 ADAM12O43184 909 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 TPD52L2O43399 206 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 B4GAT1O43505 415 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 LATO43561 262 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 RNF13O43567 381 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 CDC40O60508 579 aaKnown RBP eCLIP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 PRAMEF10O60809 474 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 PRAMEF2O60811 474 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 NDUFS6O75380 124 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 ZNF821O75541 412 aaPredicted RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 GPX5O75715 221 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 KRT33AO76009 404 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 STC2O76061 302 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 OR7A10O76100 309 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 KLHL18O94889 574 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 CDRT1O95170 752 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 SNAPINO95295 136 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 PMS2P2O95744 297 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 MT-CO1P00395 513 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 APOC1P02654 83 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 F11P03951 625 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 SOD2P04179 222 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 ATP1B1P05026 303 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 URODP06132 367 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 S100A6P06703 90 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 CD2P06729 351 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 HEXAP06865 529 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 DBIP07108 87 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 ASGR2P07307 311 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 TACSTD2P09758 323 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 OR2T7P0C7T2 308 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 ZNF865P0CJ78 1059 aaPredicted RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 SULT1A3P0DMM9 295 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 SULT1A4P0DMN0 295 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 C1GALT1C1LP0DN25 315 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 ALPPL2P10696 532 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 MGMTP16455 207 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 HLA-GP17693 338 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 NELFEP18615 380 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 LAG3P18627 525 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 TNNI3P19429 210 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 RAB3BP20337 219 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 PSMB1P20618 241 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 IDSP22304 550 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 DNASE1P24855 282 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 MPZP25189 248 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 POU1F1P28069 291 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 HTR2AP28223 471 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 MZF1P28698 734 aaPredicted RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 PRDX3P30048 256 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 SLC6A6P31641 620 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 UQCRC1P31930 480 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 VIPR1P32241 457 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 GRK4P32298 578 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 BMP8BP34820 402 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 MPIP34949 423 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 CNR2P34972 360 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 GPC1P35052 558 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 ATP6V1E1P36543 226 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 PMELP40967 661 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 BUD31P41223 144 aaPredicted RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 MAP3K8P41279 467 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 RFX2P48378 723 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 SPINT3P49223 89 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 CCT3P49368 545 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 HTR6P50406 440 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 GATMP50440 423 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 TPMTP51580 245 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 CCR8P51685 355 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 APLP1P51693 650 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 HK3P52790 923 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 DGKQP52824 942 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 LBX1P52954 281 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 MVDP53602 400 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 EPHB3P54753 998 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 MLLT10P55197 1068 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 WNT3P56703 355 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 PCBP4P57723 403 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 TAS2R41P59536 307 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 TAS2R31P59538 309 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 MAXP61244 160 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 STXBP1P61764 594 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 TBPL1P62380 186 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 HBA1P69905 142 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 PITX1P78337 314 aaPredicted RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 ARF5P84085 180 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 EFNB1P98172 346 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 CYP4F8P98187 520 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 CDK5Q00535 292 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 CAP1Q01518 475 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 HMGCS1Q01581 520 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 IFITM3Q01628 133 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 IFITM2Q01629 132 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 IL1RL1Q01638 556 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 RASGEF1BQ0VAM2 473 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 TMEM115Q12893 351 aaPredicted RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 TAF10Q12962 218 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 HNRNPA0Q13151 305 aaKnown RBP1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 DUSP8Q13202 625 aa1.88□□□□□ -2.11
TRAJ49-201ENST00000390488 SNTB2Q13425 540 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms