RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SPRYD4Q8WW59 207 aaPredicted RBP13.52□□□□□ -0.24
RTF1-201ENST00000389629 FATE1Q969F0 183 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 F2RL3Q96RI0 385 aa13.52□□□□□ -0.24
RTF1-201ENST00000389629 A0A1B0GVT2 93 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 GPR37L1O60883 481 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 ZNF3P17036 446 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 ZNF30P17039 623 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 ADH7P40394 386 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 SLC5A12Q1EHB4 618 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 PAQR6Q6TCH4 344 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 OR5P2Q8WZ92 322 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 UPB1Q9UBR1 384 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 ERI3O43414 337 aaKnown RBP13.52□□□□□ -0.25
RTF1-201ENST00000389629 MMP20O60882 483 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 PEX11BO96011 259 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 C1QBP02746 253 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 PVALBP20472 110 aaPredicted RBP13.52□□□□□ -0.25
RTF1-201ENST00000389629 NAA10P41227 235 aaPredicted RBP13.52□□□□□ -0.25
RTF1-201ENST00000389629 JAZF1Q86VZ6 243 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 TMEM17Q86X19 198 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 CCDC116Q8IYX3 515 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 ZCCHC10Q8TBK6 192 aa13.52□□□□□ -0.25
RTF1-201ENST00000389629 A0A1B0GVI7 797 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 GLTPD2A6NH11 291 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 KLK8O60259 260 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 TRIM3O75382 744 aaPredicted RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 CD70P32970 193 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 PTGER1P34995 402 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 GZMKP49863 264 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 LRIF1Q5T3J3 769 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 AMZ2Q86W34 360 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 SERPINA12Q8IW75 414 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 KCT2Q8NC54 265 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 MYEOVQ96EZ4 313 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 TMEM121BQ9BXQ6 578 aaPredicted RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 H7BY64 318 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 RNASET2O00584 256 aaKnown RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 ITGA10O75578 1167 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 TSPAN12O95859 305 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 GPX2P18283 190 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 WDR5P61964 334 aaKnown RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 TMEM69Q5SWH9 247 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 PYHIN1Q6K0P9 492 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 GALNTL5Q7Z4T8 443 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 LMNTD1Q8N9Z9 388 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 PRAP1Q96NZ9 151 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 ACTL8Q9H568 366 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 NT5DC2Q9H857 520 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 POT1Q9NUX5 634 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 C13orf42A0A1B0GVH6 325 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 UPK1AO00322 258 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 ARPC1BO15143 372 aaKnown RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 CXCL14O95715 111 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 CSNK2A2P19784 350 aaPredicted RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 RAB3BP20337 219 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 PCMT1P22061 227 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 CCND3P30281 292 aaPredicted RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 CPOQ8IVL8 374 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 ASB11Q8WXH4 323 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 NEIL2Q969S2 332 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 C17orf62Q9BQA9 187 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 SORBS1Q9BX66 1292 aaKnown RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 B3GNT2Q9NY97 397 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 CXXC1Q9P0U4 656 aaPredicted RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 LHX3Q9UBR4 397 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 FARSAQ9Y285 508 aaKnown RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 FAM183AA6NL82 134 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 F5H0A9 414 aaPredicted RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 GNSP15586 552 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 HOXC5Q00444 222 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 COX20Q5RI15 118 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 SAXO2Q658L1 398 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 TPGS2Q68CL5 300 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 BHLHA9Q7RTU4 235 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 PEG10Q86TG7 708 aaKnown RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 TFGQ92734 400 aaPredicted RBP13.51□□□□□ -0.25
RTF1-201ENST00000389629 NUBP2Q9Y5Y2 271 aa13.51□□□□□ -0.25
RTF1-201ENST00000389629 M0R082 166 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 ARFIP1P53367 373 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 RFLNAQ6ZTI6 216 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 FOXRED2Q8IWF2 684 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 POGLUT1Q8NBL1 392 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 TMEM39AQ9NV64 488 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 A0A0X1KG70 313 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 HYKKA2RU49 373 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 ELOA3DA6NLF2 546 aaPredicted RBP13.5□□□□□ -0.25
RTF1-201ENST00000389629 ZNF705EA8MWA4 302 aaPredicted RBP13.5□□□□□ -0.25
RTF1-201ENST00000389629 PRODHO43272 600 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 LEFTY1O75610 366 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 MPIP34949 423 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 OC90Q02509 493 aaPredicted RBP13.5□□□□□ -0.25
RTF1-201ENST00000389629 RGS1Q08116 209 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 ELOA3BQ3SY89 546 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 TOR2AQ5JU69 321 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 LDLRAD1Q5T700 205 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 ELOA3Q8NG57 546 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 CASTOR1Q8WTX7 329 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 GLYATL1Q969I3 302 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 CHFRQ96EP1 664 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 ARPC5LQ9BPX5 153 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms