RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 VPS35Q96QK1 796 aa4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 GPA33Q99795 319 aa4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 VGLL1Q99990 258 aa4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 RBM4BQ9BQ04 359 aaKnown RBP4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 FAM173AQ9BQD7 235 aa4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 RIBC2Q9H4K1 309 aa4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 COG4Q9H9E3 785 aa4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 TRPV5Q9NQA5 729 aa4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 FARSBQ9NSD9 589 aaKnown RBP4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 GPR83Q9NYM4 423 aa4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 FOXJ3Q9UPW0 622 aa4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 MRPL11Q9Y3B7 192 aaKnown RBP4.41□□□□□ -1.7
RNU6-40P-201ENST00000384254 WASH3PC4AMC7 463 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 E9PQ18 207 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 MAPK13O15264 365 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 ALOX15BO15296 676 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 IGSF6O95976 241 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 OAS1P00973 400 aaKnown RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 MT-ND1P03886 318 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 SNRPCP09234 159 aaKnown RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 CCDC159P0C7I6 412 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF883P0CG24 379 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 PTPN4P29074 926 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 HTR5AP47898 357 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 VCPP55072 806 aaKnown RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 MRPS6P82932 125 aaKnown RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 EXOSC2Q13868 293 aaKnown RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 TAF7Q15545 349 aaPredicted RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 TMEM44Q2T9K0 475 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 TMEM41BQ5BJD5 291 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 VWA2Q5GFL6 755 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 ACER2Q5QJU3 275 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 PAQR6Q6TCH4 344 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 WASH2PQ6VEQ5 465 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF841Q6ZN19 808 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 NET1Q7Z628 596 aaPredicted RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 CCDC36Q8IYA8 594 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF440Q8IYI8 595 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 GCNT2Q8N0V5 402 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 ABHD12Q8N2K0 398 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 OR4F17Q8NGA8 305 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 DLX4Q92988 240 aaPredicted RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 SLC25A36Q96CQ1 311 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 OR4F4Q96R69 305 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 ST6GALNAC5Q9BVH7 336 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 TPPP3Q9BW30 176 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 TSPY26PQ9H489 355 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 ESM1Q9NQ30 184 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 FAM114A2Q9NRY5 505 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 DCAF13Q9NV06 445 aaKnown RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 C1orf123Q9NWV4 160 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 DUS2Q9NX74 493 aaKnown RBP4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 BLOC1S6Q9UL45 172 aa4.4□□□□□ -1.71
RNU6-40P-201ENST00000384254 A0A0U1RQV5 110 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 TRABD2BA6NFA1 517 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 MFSD2BA6NFX1 497 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 FOXI3A8MTJ6 420 aaPredicted RBP4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 EPM2AB3EWF7 344 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 C11orf98E9PRG8 122 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 CHADO15335 359 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 MFN2O95140 757 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 APBB3O95704 486 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 TSPY4P0CV99 314 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 TSPY10P0CW01 314 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 UQCRBP14927 111 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 BRCC3P46736 316 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 CD300CQ08708 224 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 RFTN1Q14699 578 aaPredicted RBP4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF311Q5JNZ3 666 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 C9orf66Q5T8R8 295 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 GSG1LQ6UXU4 331 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 ERASQ7Z444 233 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 ERICH1Q86X53 443 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 THRSPQ92748 146 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 HPDLQ96IR7 371 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 VSTM2LQ96N03 204 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 TBCDQ9BTW9 1192 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 GSDMCQ9BYG8 508 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 WDR76Q9H967 626 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 LPAR2Q9HBW0 351 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 ADGRL4Q9HBW9 690 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 CENPMQ9NSP4 180 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 ATP6V0A2Q9Y487 856 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 MFHAS1Q9Y4C4 1052 aa4.39□□□□□ -1.71
RNU6-40P-201ENST00000384254 WASHC1A8K0Z3 465 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 ADRA1AP35348 466 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 PTGFRP43088 359 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 GSK3BP49841 420 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZP4Q12836 540 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 OVGP1Q12889 678 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 TRIP10Q15642 601 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 CD226Q15762 336 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 C14orf28Q4W4Y0 310 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF506Q5JVG8 444 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 PRR5LQ6MZQ0 368 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 LEG1Q6P5S2 330 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 ZNF562Q6V9R5 426 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 CENPUQ71F23 418 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 Q7L0L9 218 aa4.38□□□□□ -1.71
RNU6-40P-201ENST00000384254 EFCAB13Q8IY85 973 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms