RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 PPTC7Q8NI37 304 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 ZNF671Q8TAW3 534 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 TRMT10AQ8TBZ6 339 aaKnown RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 NR4A3Q92570 626 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 DPH7Q9BTV6 452 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 FXYD6Q9H0Q3 95 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 P2RY12Q9H244 342 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 KRCC1Q9NPI7 259 aaPredicted RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 TRIM36Q9NQ86 728 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 TMEM184CQ9NVA4 438 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 MRPS18AQ9NVS2 196 aaKnown RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 MAP4K5Q9Y4K4 846 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 TRAV20A0A0B4J274 112 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 OR6C65A6NJZ3 312 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 J3KTA2 159 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 DNASE2O00115 360 aaPredicted RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 TSPAN3O60637 253 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 ETFAP13804 333 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 HTR2AP28223 471 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 FEN1P39748 380 aaKnown RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 VEGFCP49767 419 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 PGDP52209 483 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 TWF1Q12792 350 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 HTR4Q13639 388 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 HLXQ14774 488 aaPredicted RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 XKR4Q5GH76 650 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 CTU1Q7Z7A3 348 aaKnown RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 SLC9B2Q86UD5 537 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 EID2Q8N6I1 236 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 HUS1BQ8NHY5 278 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 GTF3C2Q8WUA4 911 aaPredicted RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 RGMAQ96B86 450 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 MGME1Q9BQP7 344 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 FAIM2Q9BWQ8 316 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 PIGMQ9H3S5 423 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 ABRACLQ9P1F3 81 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 KLHL42Q9P2K6 505 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 CTSFQ9UBX1 484 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 ANK1P16157 1881 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 C2orf74A8MZ97 194 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 ANKRD66B4E2M5 251 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 GTPBP1O00178 669 aaKnown RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 PCDH7O60245 1069 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 RAD1O60671 282 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 SAGP10523 405 aaPredicted RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 CPN1P15169 458 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 IFNGR1P15260 489 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 LIMS1P48059 325 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 KCNJ5P48544 419 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 CDKN1CP49918 316 aaPredicted RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 ANXA11P50995 505 aaKnown RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 GPR143P51810 404 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 ACSM1Q08AH1 577 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 SREBF2Q12772 1141 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 EFEMP1Q12805 493 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 DUSP4Q13115 394 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 LRRC56Q8IYG6 542 aaPredicted RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 INTS12Q96CB8 462 aaKnown RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 CACYBPQ9HB71 228 aaKnown RBP6.87□□□□□ -1.31
DDX58-202ENST00000379883 ACSL6Q9UKU0 697 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 CAMK2AQ9UQM7 478 aa6.87□□□□□ -1.31
DDX58-202ENST00000379883 A0A1W2PQH9 124 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 KANTRA0A1W2PQU2 76 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 GABRR3A8MPY1 467 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 SNRPGP15A8MWD9 76 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 MCRIP1C9JLW8 97 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 ZNF593O00488 134 aaPredicted RBP6.86□□□□□ -1.31
DDX58-202ENST00000379883 SMAD6O43541 496 aaKnown RBP6.86□□□□□ -1.31
DDX58-202ENST00000379883 CBX7O95931 251 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 CD53P19397 219 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 PSMA3P25788 255 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 PPP2R1BP30154 601 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 CCND3P30281 292 aaPredicted RBP6.86□□□□□ -1.31
DDX58-202ENST00000379883 SLC1A3P43003 542 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 GIPRP48546 466 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 PLD1Q13393 1074 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 MPEG1Q2M385 716 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 SLC25A25Q6KCM7 469 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 ZNF613Q6PF04 617 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 SKA3Q8IX90 412 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 MDGA1Q8NFP4 955 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 BEST4Q8NFU0 473 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 SMAP2Q8WU79 429 aaPredicted RBP6.86□□□□□ -1.31
DDX58-202ENST00000379883 SORCS1Q8WY21 1168 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 CNOT9Q92600 299 aaKnown RBP6.86□□□□□ -1.31
DDX58-202ENST00000379883 EVA1AQ9H8M9 152 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 NMRK2Q9NPI5 230 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 ING1Q9UK53 422 aaPredicted RBP6.86□□□□□ -1.31
DDX58-202ENST00000379883 YARS2Q9Y2Z4 477 aaKnown RBP6.86□□□□□ -1.31
DDX58-202ENST00000379883 DSPPQ9NZW4 1301 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 TRABD2BA6NFA1 517 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 ANXA2P2A6NMY6 339 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 POM121CA8CG34 1229 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 M0QZ92 97 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 ARPC5O15511 151 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 RLN2P04090 185 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 ARAFP10398 606 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 ITPKAP23677 461 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 WNT3P56703 355 aa6.86□□□□□ -1.31
DDX58-202ENST00000379883 SOX4Q06945 474 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms