RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 UBE3DQ7Z6J8 389 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 THAP5Q7Z6K1 395 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 MFSD2AQ8NA29 543 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 PAPD5Q8NDF8 572 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 OR5K1Q8NHB7 308 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 DGCR14Q96DF8 476 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 FEVQ99581 238 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 TTYH1Q9H313 450 aaPredicted RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 STMN3Q9NZ72 180 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 SLC17A4Q9Y2C5 497 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 COLEC10Q9Y6Z7 277 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 LOC105369274A0A096LPK9 316 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 LOC102723532A0A0G2JNH3 316 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 TRBC2A0A5B9 178 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 FAM221AA4D161 298 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 LDB3O75112 727 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 GCM2O75603 506 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-201ENST00000379433 ZNF888P0CJ79 500 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-201ENST00000379433 ITGA2P17301 1181 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 DDCP20711 480 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 RAD23AP54725 363 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 ALG11Q2TAA5 492 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 PARGQ86W56 976 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 OR4N4Q8N0Y3 316 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 COQ8BQ96D53 544 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 TMEM19Q96HH6 336 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 MBOAT4Q96T53 435 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 WFDC6Q9BQY6 131 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 BHLHE41Q9C0J9 482 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-201ENST00000379433 AICDAQ9GZX7 198 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 HRASLS2Q9NWW9 162 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 TAS2R7Q9NYW3 318 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 CHTOPQ9Y3Y2 248 aaKnown RBP10.19□□□□□ -0.78
NEDD9-201ENST00000379433 NUP210Q8TEM1 1887 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-201ENST00000379433 A0A087WXM4 84 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 PRSS44E7EML9 344 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 PCDH17O14917 1159 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 POU2F2P09086 479 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 CMPK1P30085 196 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 DUSP2Q05923 314 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 TIGD6Q17RP2 521 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 ZNF614Q8N883 585 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 TTC29Q8NA56 475 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-201ENST00000379433 OR5T3Q8NGG3 340 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 OR9A2Q8NGT5 310 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 FNDC8Q8TC99 324 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 SLC38A5Q8WUX1 472 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 MAPKAP1Q9BPZ7 522 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 ZNF717Q9BY31 904 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-201ENST00000379433 TMEM74BQ9NUR3 256 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 NDUFA13Q9P0J0 144 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 REV1Q9UBZ9 1251 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 HCN4Q9Y3Q4 1203 aa10.19□□□□□ -0.78
NEDD9-201ENST00000379433 A0A1W2PR48 441 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 ANHXE9PGG2 379 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 PRKNO60260 465 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 NTN1O95631 604 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 CTSBP07858 339 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 MYF5P13349 255 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 MAP2K4P45985 399 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 KCNJ10P78508 379 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 EXOC3L2Q2M3D2 409 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 FRMPD2BQ6IN97 320 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 GALNT18Q6P9A2 607 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 EIF3MQ7L2H7 374 aaKnown RBP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 AHCYL2Q96HN2 611 aaKnown RBP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 CXorf21Q9HAI6 301 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 SIAEQ9HAT2 523 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 SPACA1Q9HBV2 294 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 MYNNQ9NPC7 610 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 SEC14L3Q9UDX4 400 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 APOBEC3BQ9UH17 382 aaKnown RBP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 BTNL2Q9UIR0 455 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 M0R3H8 397 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 CASC3O15234 703 aaKnown RBP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 HMGN1P05114 100 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 MC3RP41968 323 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 P2RX3P56373 397 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 LSM11P83369 360 aaKnown RBP eCLIP10.18□□□□□ -0.783e-7■■□□□ 13
NEDD9-201ENST00000379433 HYAL2Q12891 473 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 ZNF674Q2M3X9 581 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 ZC3H14Q6PJT7 736 aaKnown RBP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 AHSA2Q719I0 299 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 CBLL1Q75N03 491 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 SYNPOQ8N3V7 929 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 OXR1Q8N573 874 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 SLC5A8Q8N695 610 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 PACRGLQ8N7B6 248 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 PHF10Q8WUB8 498 aaKnown RBP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 GABRG3Q99928 467 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 DOHHQ9BU89 302 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 GLIPR2Q9H4G4 154 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 LMAN1LQ9HAT1 526 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 GIMAP4Q9NUV9 329 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.18□□□□□ -0.78
NEDD9-201ENST00000379433 ATG2AQ2TAZ0 1938 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 CACNA1CQ13936 2221 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 B4GALT2O60909 372 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 CTSVO60911 334 aa10.18□□□□□ -0.78
NEDD9-201ENST00000379433 ANGPTL1O95841 491 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms