RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 ZNF639Q9UID6 485 aa12.89□□□□□ -0.35
UPK1A-202ENST00000379013 TEKT2Q9UIF3 430 aa12.89□□□□□ -0.35
UPK1A-202ENST00000379013 FBXL4Q9UKA2 621 aa12.89□□□□□ -0.35
UPK1A-202ENST00000379013 L3MBTL1Q9Y468 752 aa12.89□□□□□ -0.35
UPK1A-202ENST00000379013 GMEB1Q9Y692 573 aa12.89□□□□□ -0.35
UPK1A-202ENST00000379013 ASPDHA6ND91 283 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 A8MUA0 341 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 CLIC1O00299 241 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 UPK1AO00322 258 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 FBP2O00757 339 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 ASNA1O43681 348 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 CBX6O95503 412 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 EFNA1P20827 205 aaPredicted RBP12.88□□□□□ -0.35
UPK1A-202ENST00000379013 CDK9P50750 372 aaKnown RBP12.88□□□□□ -0.35
UPK1A-202ENST00000379013 MRPS35P82673 323 aaKnown RBP12.88□□□□□ -0.35
UPK1A-202ENST00000379013 ZNF155Q12901 538 aaPredicted RBP12.88□□□□□ -0.35
UPK1A-202ENST00000379013 MYBPC3Q14896 1274 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 PCOLCEQ15113 449 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 LTB4RQ15722 352 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 SPATS1Q496A3 300 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 LACTB2Q53H82 288 aaPredicted RBP12.88□□□□□ -0.35
UPK1A-202ENST00000379013 PAGE3Q5JUK9 113 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 ATAD3BQ5T9A4 648 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 TCTN3Q6NUS6 607 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 KBTBD2Q8IY47 623 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 PGAM4Q8N0Y7 254 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 OR7G2Q8NG99 324 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 OR52R1Q8NGF1 315 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 NCLNQ969V3 563 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 C8orf44Q96CB5 159 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 ANKRD27Q96NW4 1050 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 NPAS2Q99743 824 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 ACTRT3Q9BYD9 372 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 ING2Q9H160 280 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 TPT1P8Q9HAU6 139 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 SPAG4Q9NPE6 437 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 ATP13A2Q9NQ11 1180 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 SIRT3Q9NTG7 399 aaPredicted RBP12.88□□□□□ -0.35
UPK1A-202ENST00000379013 EXD2Q9NVH0 621 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 GIN1Q9NXP7 522 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 MRTO4Q9UKD2 239 aaKnown RBP12.88□□□□□ -0.35
UPK1A-202ENST00000379013 PCDHB14Q9Y5E9 798 aa12.88□□□□□ -0.35
UPK1A-202ENST00000379013 B2RBV5 119 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 CDK2AP1O14519 115 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
UPK1A-202ENST00000379013 ZFAND5O76080 213 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 DDAH2O95865 285 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 AK1P00568 194 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 IGKV3-11P04433 115 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 PRKAG1P54619 331 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 PSMD4P55036 377 aaKnown RBP12.87□□□□□ -0.35
UPK1A-202ENST00000379013 NRG3P56975 720 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 SLC37A1P57057 533 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 DUSP2Q05923 314 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 SRSF1Q07955 248 aaKnown RBP eCLIP12.87□□□□□ -0.35
UPK1A-202ENST00000379013 BNIP1Q12981 228 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 PRSS53Q2L4Q9 553 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 TRMT12Q53H54 448 aaKnown RBP12.87□□□□□ -0.35
UPK1A-202ENST00000379013 SAXO2Q658L1 398 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 DLEU7Q6UYE1 221 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 ASB18Q6ZVZ8 466 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 C6orf120Q7Z4R8 191 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 YTHDF3Q7Z739 585 aaKnown RBP12.87□□□□□ -0.35
UPK1A-202ENST00000379013 RETREG3Q86VR2 466 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 SHISA5Q8N114 240 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 SLC5A8Q8N695 610 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 AMER2Q8N7J2 671 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 OR52N2Q8NGI0 321 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 NUBPLQ8TB37 319 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 MIPOL1Q8TD10 442 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 ADAMTS15Q8TE58 950 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 ZNF721Q8TF20 911 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 ZFP90Q8TF47 636 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 JADE3Q92613 823 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 MAGED4Q96JG8 741 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 STACQ99469 402 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 INPP5KQ9BT40 448 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 THUMPD3Q9BV44 507 aaKnown RBP12.87□□□□□ -0.35
UPK1A-202ENST00000379013 DEFB126Q9BYW3 111 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 IL1RL2Q9HB29 575 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 Q9N2J8 555 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 VAPAQ9P0L0 249 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 ABI3Q9P2A4 366 aa12.87□□□□□ -0.35
UPK1A-202ENST00000379013 TRBV11-1A0A0K0K1C0 115 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 MYOCOSA0A1B0GUC4 107 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 C2orf92A0A1B0GVN3 265 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 A0A1W2PS29 197 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 A6NL46 340 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 ACOX3O15254 700 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 GYG2O15488 501 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 CEACAM4O75871 244 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 PSMG1O95456 288 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 CBX7O95931 251 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 HMGN2P05204 90 aaKnown RBP12.86□□□□□ -0.35
UPK1A-202ENST00000379013 SERPINA7P05543 415 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 GSNP06396 782 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 ALOX5P09917 674 aa12.86□□□□□ -0.35
UPK1A-202ENST00000379013 CT62P0C5K7 136 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms