RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 ABCE1P61221 599 aaKnown RBP17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 DUSP2Q05923 314 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 MGAT2Q10469 447 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 MAP4K2Q12851 820 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 TBCELQ5QJ74 424 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 AGBL2Q5U5Z8 902 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 HHATQ5VTY9 493 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 NOXRED1Q6NXP6 359 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 FAM180BQ6P0A1 224 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 CDC26Q8NHZ8 85 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 FAM76AQ8TAV0 307 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 MGARPQ8TDB4 240 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 SARAFQ96BY9 339 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 CNRIP1Q96F85 164 aaPredicted RBP17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 GAL3ST4Q96RP7 486 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 C20orf27Q9GZN8 174 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 OR10A5Q9H207 317 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 NPDC1Q9NQX5 325 aaPredicted RBP17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 C1orf109Q9NX04 203 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 ZNF639Q9UID6 485 aa17.36■□□□□ 0.37
TMEM88B-201ENST00000378821 TRGV5A0A0B4J1U4 118 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 CAPN14A8MX76 684 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 LSM1O15116 133 aaKnown RBP17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 SEC22BO75396 215 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 SKAP2O75563 359 aaPredicted RBP17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 ATP1B1P05026 303 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 GLI4P10075 376 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 DRD2P14416 443 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 FEN1P39748 380 aaKnown RBP17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 GSTM5P46439 218 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 KCNJ2P63252 427 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 XKR7Q5GH72 579 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 FAM13CQ8NE31 585 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 OR5M9Q8NGP3 310 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 CTHRC1Q96CG8 243 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 METTL2AQ96IZ6 378 aaKnown RBP17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 FCRL1Q96LA6 429 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 SORT1Q99523 831 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 MYNNQ9NPC7 610 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 SPRR3Q9UBC9 169 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 GIMAP2Q9UG22 337 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 UTS2RQ9UKP6 389 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 NPFFR2Q9Y5X5 522 aa17.35■□□□□ 0.37
TMEM88B-201ENST00000378821 TP53I11O14683 189 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 CAPN3P20807 821 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 NT5EP21589 574 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 TACR1P25103 407 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 MSX1P28360 303 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 SLC1A6P48664 564 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 SLC18A1P54219 525 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 RPL38P63173 70 aaKnown RBP17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 HEPACAMQ14CZ8 416 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 RPS6KA2Q15349 733 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 PRICKLE4Q2TBC4 344 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 ARHGAP21Q5T5U3 1957 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 PRAMEF20Q5VT98 475 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 FAM71E1Q6IPT2 247 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 TMEM81Q6P7N7 255 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 B3GNT6Q6ZMB0 384 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 MEX3BQ6ZN04 569 aaKnown RBP17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 HDXQ7Z353 690 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 CCDC71Q8IV32 467 aaPredicted RBP17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 HOMEZQ8IX15 550 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 ZNF781Q8N8C0 355 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 OR5M3Q8NGP4 307 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 NEIL3Q8TAT5 605 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 SPPL2AQ8TCT8 520 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 EXOSC8Q96B26 276 aaKnown RBP17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 C3orf30Q96M34 536 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 ZNF681Q96N22 645 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 ANGPTL4Q9BY76 406 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 KCNJ16Q9NPI9 418 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 PSME2Q9UL46 239 aa17.34■□□□□ 0.37
TMEM88B-201ENST00000378821 SNX4O95219 450 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 JUNP05412 331 aaKnown RBP17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 GABRA1P14867 456 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 NAGAP17050 411 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 CSNK2A2P19784 350 aaPredicted RBP17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 DDCP20711 480 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 GPX3P22352 226 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 GRK2P25098 689 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 FBXW4P57775 412 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 C2orf80Q0P641 193 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 BST1Q10588 318 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 STX3Q13277 289 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 LTB4RQ15722 352 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 PRSS53Q2L4Q9 553 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 GALNTL6Q49A17 601 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 RFTN2Q52LD8 501 aaPredicted RBP17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 TTMPQ5BVD1 217 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 WLSQ5T9L3 541 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 FNDC7Q5VTL7 733 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 ZNF585AQ6P3V2 769 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 EGLN2Q96KS0 407 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 DOHHQ9BU89 302 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 UCK2Q9BZX2 261 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 UBQLN3Q9H347 655 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 LDAHQ9H6V9 325 aa17.33■□□□□ 0.36
TMEM88B-201ENST00000378821 MCCC2Q9HCC0 563 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms