RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 DMPKQ09013 629 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 MAP4K2Q12851 820 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 SLC9A5Q14940 896 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 IRF4Q15306 451 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 SNAPC1Q16533 368 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 GLYR1Q49A26 553 aaPredicted RBP10.27□□□□□ -0.76
BEST1-201ENST00000378043 TMEM35AQ53FP2 167 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 C2orf27AQ580R0 203 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 C3orf38Q5JPI3 329 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 ABHD17CQ6PCB6 329 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 TMEM107Q6UX40 140 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 PRICKLE2Q7Z3G6 844 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 MRGPREQ86SM8 312 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 UBQLNLQ8IYU4 475 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 SYT14Q8NB59 555 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 MSLNLQ96KJ4 702 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 SAP130Q9H0E3 1048 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 SLC38A1Q9H2H9 487 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 RERGLQ9H628 205 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 ABCB9Q9NP78 766 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 TIGARQ9NQ88 270 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 THAP10Q9P2Z0 257 aaPredicted RBP10.27□□□□□ -0.76
BEST1-201ENST00000378043 ITGB1BP2Q9UKP3 347 aa10.27□□□□□ -0.76
BEST1-201ENST00000378043 SPIN1Q9Y657 262 aaPredicted RBP10.27□□□□□ -0.76
BEST1-201ENST00000378043 A0A0G2JPF8 293 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 LINC01553A4QN01 128 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 HNRNPCL2B2RXH8 293 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 HNRNPCL3B7ZW38 293 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 ZIC2O95409 532 aaPredicted RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 IL1AP01583 271 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 HNRNPCL4P0DMR1 293 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 ATP5A1P25705 553 aaKnown RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 PKLRP30613 574 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 NTSP30990 170 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 SMSP52788 366 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 WNT4P56705 351 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 OR2B6P58173 313 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 GPAT3Q53EU6 434 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 SLC7A5P1Q8MH63 180 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 LINC00471Q8N535 108 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 FAM181AQ8N9Y4 354 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 GALNT6Q8NCL4 622 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 SLC9A6Q92581 669 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 TMCO6Q96DC7 493 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 SPATA5L1Q9BVQ7 753 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 FAIM2Q9BWQ8 316 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 PINK1Q9BXM7 581 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 WDR26Q9H7D7 661 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 CNIH4Q9P003 139 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 ZFR2Q9UPR6 939 aaKnown RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 PCDHGB2Q9Y5G2 931 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 A0A1W2PQ09 198 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 PRR19A6NJB7 356 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 CASC3O15234 703 aaKnown RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 CCNKO75909 580 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 LIMS3P0CW19 117 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 LIMS4P0CW20 117 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 ACP2P11117 423 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 PEBP1P30086 187 aaKnown RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 SDC2P34741 201 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 TRHRP34981 398 aaPredicted RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 WASP42768 502 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 RPS25P62851 125 aaKnown RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 SNRPNP63162 240 aaKnown RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 MLLT1Q03111 559 aaPredicted RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 CHRNEQ04844 493 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 HNRNPA0Q13151 305 aaKnown RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 SHFQ7M4L6 423 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 ADGRD2Q7Z7M1 963 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 VRK2Q86Y07 508 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 ZNF485Q8NCK3 441 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 OR2L8Q8NGY9 312 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 SETD6Q8TBK2 473 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 TMEM163Q8TC26 289 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 SFXN5Q8TD22 340 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 GATAD2BQ8WXI9 593 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 FGF13Q92913 245 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 SMARCD2Q92925 531 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 TM9SF2Q99805 663 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 TRMT61BQ9BVS5 477 aaKnown RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 FGF20Q9NP95 211 aaPredicted RBP10.27□□□□□ -0.77
BEST1-201ENST00000378043 SEMA4GQ9NTN9 838 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 SPHK1Q9NYA1 384 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 CMAHPQ9Y471 501 aa10.27□□□□□ -0.77
BEST1-201ENST00000378043 SMIM30A4D0T7 59 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 PRODHO43272 600 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 FHP07954 510 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 CERS1P27544 350 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 UBE3AQ05086 875 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 RUNX1T1Q06455 604 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 RAB40BQ12829 278 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 TPBGQ13641 420 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 PLK5Q496M5 336 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 CLDN22Q8N7P3 220 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 TTLQ8NG68 377 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 OR52E1Q8NGJ3 308 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 DIO2Q92813 273 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 RNFT2Q96EX2 444 aa10.26□□□□□ -0.77
BEST1-201ENST00000378043 ZNF486Q96H40 463 aaPredicted RBP10.26□□□□□ -0.77
BEST1-201ENST00000378043 ZNF681Q96N22 645 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms