RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TTLL8A6PVC2 850 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 SOX30O94993 753 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 CT45A8P0DMV1 189 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 CT45A9P0DMV2 189 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 EFNA1P20827 205 aaPredicted RBP12.21□□□□□ -0.45
CKAP2-202ENST00000378034 ABCD3P28288 659 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 IL12AP29459 219 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 RPP38P78345 283 aaKnown RBP12.21□□□□□ -0.45
CKAP2-202ENST00000378034 PHC1P78364 1004 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF155Q12901 538 aaPredicted RBP12.21□□□□□ -0.45
CKAP2-202ENST00000378034 NTRK2Q16620 822 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 MAPKAPK3Q16644 382 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 VPS26BQ4G0F5 336 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 CT45A2Q5DJT8 189 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 MSANTD1Q6ZTZ1 278 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 CDRT4Q8N9R6 151 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 FAM98AQ8NCA5 519 aaKnown RBP12.21□□□□□ -0.45
CKAP2-202ENST00000378034 HOXB13Q92826 284 aaPredicted RBP12.21□□□□□ -0.45
CKAP2-202ENST00000378034 FAM120BQ96EK7 910 aaKnown RBP12.21□□□□□ -0.45
CKAP2-202ENST00000378034 THOC1Q96FV9 657 aaKnown RBP12.21□□□□□ -0.45
CKAP2-202ENST00000378034 CCDC115Q96NT0 180 aa12.21□□□□□ -0.45
CKAP2-202ENST00000378034 SECISBP2Q96T21 854 aaKnown RBP12.21□□□□□ -0.45
CKAP2-202ENST00000378034 FAM234BA2RU67 622 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 KLRC4-KLRK1H3BQV0 150 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 TP53I11O14683 189 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 RASAL1O95294 804 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 CCT3P49368 545 aaKnown RBP12.21□□□□□ -0.46
CKAP2-202ENST00000378034 PRIM2P49643 509 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 POLR2JP52435 117 aaKnown RBP12.21□□□□□ -0.46
CKAP2-202ENST00000378034 HBA1P69905 142 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 SQLEQ14534 574 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 CYP27C1Q4G0S4 372 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 SLC34A3Q8N130 599 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 PSD4Q8NDX1 1056 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 DNAJB8Q8NHS0 232 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 CHMP6Q96FZ7 201 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 OR52E6Q96RD3 313 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 CXorf36Q9H7Y0 433 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 SH2D2AQ9NP31 389 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 ZCCHC3Q9NUD5 404 aaKnown RBP12.21□□□□□ -0.46
CKAP2-202ENST00000378034 CNIH4Q9P003 139 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 KLHL14Q9P2G3 628 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 SNX8Q9Y5X2 465 aa12.21□□□□□ -0.46
CKAP2-202ENST00000378034 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 ABCB7O75027 752 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 PPM1BO75688 479 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 KRT16P08779 473 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 MAP3K8P41279 467 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 ST13P50502 369 aaKnown RBP12.2□□□□□ -0.46
CKAP2-202ENST00000378034 ARFIP2P53365 341 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 PRKAG1P54619 331 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 PSG6Q00889 435 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 PLCXD2Q0VAA5 305 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 INPP5JQ15735 1006 aaPredicted RBP12.2□□□□□ -0.46
CKAP2-202ENST00000378034 SPDYE7PQ495Y7 208 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 SLC22A10Q63ZE4 541 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 PAOXQ6QHF9 649 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 NUP54Q7Z3B4 507 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 MDGA2Q7Z553 956 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 SLC44A2Q8IWA5 706 aaPredicted RBP12.2□□□□□ -0.46
CKAP2-202ENST00000378034 CLECL1Q8IZS7 167 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 POGLUT1Q8NBL1 392 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 OR4A15Q8NGL6 344 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 GOT1L1Q8NHS2 421 aaPredicted RBP12.2□□□□□ -0.46
CKAP2-202ENST00000378034 PAQR8Q8TEZ7 354 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 GIMAP5Q96F15 307 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 TMEM120AQ9BXJ8 343 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 EPN3Q9H201 632 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 Q9N2J8 555 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 KLHL1Q9NR64 748 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 SACM1LQ9NTJ5 587 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 GIN1Q9NXP7 522 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 LUZP4Q9P127 313 aa12.2□□□□□ -0.46
CKAP2-202ENST00000378034 MRTO4Q9UKD2 239 aaKnown RBP12.2□□□□□ -0.46
CKAP2-202ENST00000378034 COPG1Q9Y678 874 aaKnown RBP12.2□□□□□ -0.46
CKAP2-202ENST00000378034 ASPDHA6ND91 283 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 CRYABP02511 175 aaKnown RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 P04436 131 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 ABCB1P08183 1280 aaPredicted RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 KRT20P35900 424 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 ZFP36L2P47974 494 aaKnown RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 DGKQP52824 942 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 CORO7P57737 925 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 MRPS22P82650 360 aaKnown RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 CGB2Q6NT52 195 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 MFSD12Q6NUT3 480 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 NPSR1Q6W5P4 371 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 PRICKLE2Q7Z3G6 844 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 SZRD1Q7Z422 152 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 GALNTL5Q7Z4T8 443 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 CPT1CQ8TCG5 803 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 OMA1Q96E52 524 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 RMND5AQ9H871 391 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 AGPAT4Q9NRZ5 378 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 MAP10Q9P2G4 905 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 OR10H1Q9Y4A9 318 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 BSNQ9UPA5 3926 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 CFAP46Q8IYW2 2715 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 EXPH5Q8NEV8 1989 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 ANKRD33BA6NCL7 494 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms