RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 MFSD9Q8NBP5 474 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 AQP11Q8NBQ7 271 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 OR2L5Q8NG80 312 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 TSACCQ96A04 125 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 OTUB1Q96FW1 271 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 COL21A1Q96P44 957 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 TRNT1Q96Q11 434 aaKnown RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 ROGDIQ9GZN7 287 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 KCND3Q9UK17 655 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 MDC1Q14676 2089 aaKnown RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 SEMA7AO75326 666 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 CHRM5P08912 532 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 OR3A3P47888 321 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 KCNJ5P48544 419 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 CD83Q01151 205 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 HTR4Q13639 388 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 GPR19Q15760 415 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 ZNF425Q6IV72 752 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 OLIG3Q7RTU3 272 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 TBC1D19Q8N5T2 526 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 OR4D11Q8NGI4 311 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 ANGPTL6Q8NI99 470 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 VANGL1Q8TAA9 524 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 ASB12Q8WXK4 309 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 SNAPC3Q92966 411 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 TREX2Q9BQ50 279 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 WFDC6Q9BQY6 131 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 YIPF4Q9BSR8 244 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 SARGQ9BW04 601 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 SLA2Q9H6Q3 261 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 NMNAT1Q9HAN9 279 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 ACOXLQ9NUZ1 547 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 ZNF624Q9P2J8 865 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 SCML1Q9UN30 329 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 SNX7Q9UNH6 387 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 SPEF1Q9Y4P9 236 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 F5P12259 2224 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 XIRP2A4UGR9 3374 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 TRBV4-1A0A0J9YWV2 114 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 FAM227AF5H4B4 570 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 HOXC4P09017 264 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 C8orf89P0DMQ9 161 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 IFI30P13284 250 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 AZGP1P25311 298 aaKnown RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 CERS1P27544 350 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 NTSP30990 170 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 ACSL1P33121 698 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 KIAA1024LP59773 190 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 DUSP2Q05923 314 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 BAK1Q16611 211 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 SPANXN2Q5MJ10 180 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 ZNF770Q6IQ21 691 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 TCTN3Q6NUS6 607 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 CCDC190Q86UF4 302 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 TAGAPQ8N103 731 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 CNRIP1Q96F85 164 aaPredicted RBP13.16□□□□□ -0.3
MSH5-202ENST00000375740 MRGPRX1Q96LB2 322 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 BMFQ96LC9 184 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 ZNF354BQ96LW1 612 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 ZNF607Q96SK3 696 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 DHRS9Q9BPW9 319 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 COPS4Q9BT78 406 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 KCNK12Q9HB15 430 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 PLCXD1Q9NUJ7 323 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 P2RX2Q9UBL9 471 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 SEC14L3Q9UDX4 400 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 PSORS1C1Q9UIG5 152 aa13.16□□□□□ -0.3
MSH5-202ENST00000375740 A0A1W2PS29 197 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 NR2F1P10589 423 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 ACADMP11310 421 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 NFATC4Q14934 902 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 PTGES3Q15185 160 aaKnown RBP13.15□□□□□ -0.3
MSH5-202ENST00000375740 TAB1Q15750 504 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 TMEM31Q5JXX7 168 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 FAAH2Q6GMR7 532 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 KLHL17Q6TDP4 642 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 KIAA1324Q6UXG2 1013 aaKnown RBP13.15□□□□□ -0.3
MSH5-202ENST00000375740 USP30Q70CQ3 517 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 SLC46A3Q7Z3Q1 461 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 GRAMD2AQ8IUY3 354 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 PIK3R3Q92569 461 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 GGHQ92820 318 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 NACC2Q96BF6 587 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 SLC6A14Q9UN76 642 aa13.15□□□□□ -0.3
MSH5-202ENST00000375740 BTN3A3O00478 584 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 TMCC2O75069 709 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 SCO1O75880 301 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 AIFM1O95831 613 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 GABRB1P18505 474 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 FEN1P39748 380 aaKnown RBP13.15□□□□□ -0.31
MSH5-202ENST00000375740 NUDT6P53370 316 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 KRR1Q13601 381 aaKnown RBP13.15□□□□□ -0.31
MSH5-202ENST00000375740 TJAP1Q5JTD0 557 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 MLIPQ5VWP3 458 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 DEF8Q6ZN54 512 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 DNAJC22Q8N4W6 341 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.31
MSH5-202ENST00000375740 RASSF5Q8WWW0 418 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms