RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 LIMS4P0CW20 117 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 DDCP20711 480 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 MAPK12P53778 367 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC7A9P82251 487 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 EFNB1P98172 346 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 CDK5Q00535 292 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 MLLT1Q03111 559 aaPredicted RBP13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 C3orf38Q5JPI3 329 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 TMEM215Q68D42 235 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 TRAPPC5Q8IUR0 188 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 OR6T1Q8NGN1 323 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 HCAR2Q8TDS4 363 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 UFD1Q92890 307 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 KIAA1143Q96AT1 154 aaPredicted RBP13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 ATF6BQ99941 703 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 SOSTQ9BQB4 213 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 FAM83CQ9BQN1 747 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 ACAD8Q9UKU7 415 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 GSTK1Q9Y2Q3 226 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 C2orf92A0A1B0GVN3 265 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 K7ESM1 405 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 MEN1O00255 615 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 PDPK1O15530 556 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 ICMTO60725 284 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 EVI2BP34910 448 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 OR3A3P47888 321 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 SLC6A11P48066 632 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 EPHA5P54756 1037 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 PPP3R1P63098 170 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 KLHL22Q53GT1 634 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 CLEC12AQ5QGZ9 265 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 QRFPRQ96P65 431 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 ZNF607Q96SK3 696 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 WACQ9BTA9 647 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 OR2AG1Q9H205 316 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 DKK3Q9UBP4 350 aa13.3□□□□□ -0.28
CLCNKA-202ENST00000375692 A0A0G2JN53 185 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 ISM1B1AKI9 464 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 QSOX1O00391 747 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 HCN1O60741 890 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 EPPINO95925 133 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 CH25HO95992 272 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 C1QBP02746 253 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 PRKAR1AP10644 381 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 ACP2P11117 423 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 CEBPBP17676 345 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 XPAP23025 273 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 MTNR1AP48039 350 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 EVX1P49640 407 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 ABATP80404 500 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 CNTN1Q12860 1018 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 TNK1Q13470 666 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 COL9A2Q14055 689 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 LRRC32Q14392 662 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 SIGIRRQ6IA17 410 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 MZT2BQ6NZ67 158 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 IKBIPQ70UQ0 350 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 LIX1LQ8IVB5 337 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 ELMOD2Q8IZ81 293 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 TBC1D19Q8N5T2 526 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 DUSP18Q8NEJ0 188 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 OR4F15Q8NGB8 312 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 TMEM163Q8TC26 289 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 SMPDL3AQ92484 453 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 YIPF4Q9BSR8 244 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 ZNF717Q9BY31 904 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 SAP130Q9H0E3 1048 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 TRPC4Q9UBN4 977 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 A0A1W2PRQ8 180 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 TSC22D2O75157 780 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 NR2F1P10589 423 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 GABRA5P31644 462 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 CCT3P49368 545 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 AGFG1P52594 562 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 ALDH6A1Q02252 535 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 C19orf57Q0VDD7 668 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 ADIPOR2Q86V24 386 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 PLCZ1Q86YW0 608 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 AMER3Q8N944 861 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 MORN4Q8NDC4 146 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 OR8D4Q8NGM9 314 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 LRRC3BQ96PB8 259 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 TMEM43Q9BTV4 400 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 OR51I1Q9H343 314 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 TEKT2Q9UIF3 430 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 PRKAB1Q9Y478 270 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
CLCNKA-202ENST00000375692 TMEM129A0AVI4 362 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 FEZF1A0PJY2 475 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 CD8B2A6NJW9 211 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 LINC01565O15544 149 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 SOD1P00441 154 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 HLA-DQB1P01920 261 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ELFN1P0C7U0 828 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 CD8BP10966 210 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 ARSBP15848 533 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 CELP19835 753 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 SMSP52788 366 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 SMIM11AP58511 58 aa13.28□□□□□ -0.28
CLCNKA-202ENST00000375692 RAB40BQ12829 278 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms