RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 RECQLP46063 649 aaPredicted RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 CCT3P49368 545 aaKnown RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 ATP12AP54707 1039 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 SLC7A9P82251 487 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 CSTF1Q05048 431 aaKnown RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 ZNF155Q12901 538 aaPredicted RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 LRRC32Q14392 662 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 CCDC85BQ15834 202 aaPredicted RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 TOR2AQ5JU69 321 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 CCNJQ5T5M9 372 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 MEX3DQ86XN8 651 aaKnown RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 SPERTQ8NA61 448 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 POGLUT1Q8NBL1 392 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 OR8D4Q8NGM9 314 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 SMG7Q92540 1137 aaKnown RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 MARVELD3Q96A59 401 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 GPR137Q96N19 417 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 HDHD2Q9H0R4 259 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 OR51I1Q9H343 314 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 PIGUQ9H490 435 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 CTPS2Q9NRF8 586 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 EXTL2Q9UBQ6 330 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 NCKAP1Q9Y2A7 1128 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 FABP7O15540 132 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 AKAP8O43823 692 aaKnown RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 TIMP2P16035 220 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 CELP19835 753 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 SLC6A1P30531 599 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 GPR176Q14439 515 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 FAM205BPQ63HN1 556 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 OR5D16Q8NGK9 328 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 MRPS31Q92665 395 aaKnown RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 UCN3Q969E3 161 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 EXOSC8Q96B26 276 aaKnown RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 ZNF689Q96CS4 500 aaPredicted RBP19.91■□□□□ 0.78
UPF3A-202ENST00000375299 SLC35G5Q96KT7 338 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 C11orf49Q9H6J7 331 aa19.91■□□□□ 0.78
UPF3A-202ENST00000375299 CD8B2A6NJW9 211 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 CHST10O43529 356 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 LEFTY1O75610 366 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 EPPINO95925 133 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 NR2F1P10589 423 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 CD8BP10966 210 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 ELK1P19419 428 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 CDH11P55287 796 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 RAB33AQ14088 237 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 INSL4Q14641 139 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 PRAMEF14Q5SWL7 426 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 PRAMEF13Q5VWM6 474 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 IDO2Q6ZQW0 420 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 KRT78Q8N1N4 520 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 XAGE5Q8WWM1 108 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 MRPL39Q9NYK5 338 aaKnown RBP19.9■□□□□ 0.78
UPF3A-202ENST00000375299 SPG21Q9NZD8 308 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 B8ZZF3 427 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 CHP2O43745 196 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 TBX6O95947 436 aaPredicted RBP19.9■□□□□ 0.78
UPF3A-202ENST00000375299 PPP2R1BP30154 601 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 ACSM1Q08AH1 577 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 FCN2Q15485 313 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 KHDRBS2Q5VWX1 349 aaKnown RBP19.9■□□□□ 0.78
UPF3A-202ENST00000375299 GAREM2Q75VX8 874 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 OLIG3Q7RTU3 272 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 PRICKLE2Q7Z3G6 844 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 KLHL36Q8N4N3 616 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 OR4M2Q8NGB6 313 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 OR4F15Q8NGB8 312 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 GNPDA2Q8TDQ7 276 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 SETD7Q8WTS6 366 aaKnown RBP19.9■□□□□ 0.78
UPF3A-202ENST00000375299 ACOT12Q8WYK0 555 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 ASB6Q9NWX5 421 aa19.9■□□□□ 0.78
UPF3A-202ENST00000375299 ELF5Q9UKW6 265 aaPredicted RBP19.9■□□□□ 0.78
UPF3A-202ENST00000375299 A0A0A6YYJ9 748 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 C2orf92A0A1B0GVN3 265 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 PI15O43692 258 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 BSGP35613 385 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 PER3P56645 1201 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 TLE2Q04725 743 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 FAM83HQ6ZRV2 1179 aaPredicted RBP19.89■□□□□ 0.77
UPF3A-202ENST00000375299 FAM129CQ86XR2 697 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 TCEAL8Q8IYN2 117 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 DNAJC5GQ8N7S2 189 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 PHF21AQ96BD5 680 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 UBL7Q96S82 380 aaPredicted RBP19.89■□□□□ 0.77
UPF3A-202ENST00000375299 NARFLQ9H6Q4 476 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 KCNK12Q9HB15 430 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 EIF3KQ9UBQ5 218 aaKnown RBP19.89■□□□□ 0.77
UPF3A-202ENST00000375299 ING4Q9UNL4 249 aa19.89■□□□□ 0.77
UPF3A-202ENST00000375299 LINC00862A6NCI5 91 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 LEFTY2O00292 366 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 EFCAB14O75071 495 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 PLA1AQ53H76 456 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 ARSIQ5FYB1 569 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 VASNQ6EMK4 673 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 TMEM107Q6UX40 140 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 DPPA4Q7L190 304 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 SZRD1Q7Z422 152 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 DEFB128Q7Z7B8 93 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 F2RL3Q96RI0 385 aa19.88■□□□□ 0.77
UPF3A-202ENST00000375299 BTBD1Q9H0C5 482 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms