RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 EMC10Q5UCC4 262 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 KCTD18Q6PI47 426 aaPredicted RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 METTL25Q8N6Q8 603 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 NUP43Q8NFH3 380 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 FOXJ1Q92949 421 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 RHBDF1Q96CC6 855 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 PITX2Q99697 317 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 PBDC1Q9BVG4 233 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 PPP1R14DQ9NXH3 145 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 GGT3PA6NGU5 568 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 ARGFXA6NJG6 315 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 H3BUI4 141 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 RAC2P15153 192 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 SLC2A5P22732 501 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 AQP2P41181 271 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 GPR4P46093 362 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 NFATC4Q14934 902 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF678Q5SXM1 525 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 IER5LQ5T953 404 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 NCCRP1Q6ZVX7 275 aaPredicted RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 IGFN1Q86VF2 1251 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 TOE1Q96GM8 510 aaKnown RBP13.63□□□□□ -0.23
TRAF1-201ENST00000373887 NAV1Q8NEY1 1877 aa13.63□□□□□ -0.23
TRAF1-201ENST00000373887 SOX30O94993 753 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 PLCXD2Q0VAA5 305 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 MALLQ13021 153 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 PCLAFQ15004 111 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 C2orf76Q3KRA6 126 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 Q6ZSR6 202 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 HOXB13Q92826 284 aaPredicted RBP13.62□□□□□ -0.23
TRAF1-201ENST00000373887 GIMAP5Q96F15 307 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 FAIMQ9NVQ4 179 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 CA5BQ9Y2D0 317 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 KIAA0513O60268 411 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 CD9P21926 228 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 AWAT2Q6E213 333 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 ELP2Q6IA86 826 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF529Q6P280 563 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 TOR1AIP2Q8NFQ8 470 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 IL1RNP18510 177 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 PTPN6P29350 595 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 ETV5P41161 510 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 PRKXP51817 358 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 ARSFP54793 590 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 SSTP61278 116 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 EMX2Q04743 252 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 CRYZQ08257 329 aaKnown RBP13.62□□□□□ -0.23
TRAF1-201ENST00000373887 HACD2Q6Y1H2 254 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 SLC39A11Q8N1S5 342 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 NPWQ8N729 165 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 FAM46BQ96A09 425 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 LMF1Q96S06 567 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 SERTAD4Q9NUC0 356 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 WDPCPO95876 746 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 DLSTP36957 453 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 RAB28P51157 221 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 HYAL4Q2M3T9 481 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 ZNF181Q2M3W8 571 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 MEDAGQ5VYS4 303 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 SLC27A4Q6P1M0 643 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 SHFQ7M4L6 423 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 HS3ST5Q8IZT8 346 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 C3orf58Q8NDZ4 430 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 TMEM45AQ9NWC5 275 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 CHD4Q14839 1912 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 BPIP17213 487 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 MSR1P21757 451 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 PYCR1P32322 319 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 CDKN2DP55273 166 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 RPS26P62854 115 aaKnown RBP13.62□□□□□ -0.23
TRAF1-201ENST00000373887 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.62□□□□□ -0.23
TRAF1-201ENST00000373887 BBS10Q8TAM1 723 aa13.62□□□□□ -0.23
TRAF1-201ENST00000373887 BCAS2O75934 225 aaPredicted RBP13.61□□□□□ -0.23
TRAF1-201ENST00000373887 ACTL6BO94805 426 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 SLC18A1P54219 525 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 PSPHP78330 225 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 AKR1C8PQ5T2L2 129 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 TMEM234Q8WY98 164 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 TSGA13Q96PP4 275 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 HDHD5Q9BXW7 423 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 MMP27Q9H306 513 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 MYH1P12882 1939 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 BOLA2-SMG1P6H3BVE0 249 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 DFNA5O60443 496 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 PTH2RP49190 550 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 RIDAP52758 137 aaKnown RBP13.61□□□□□ -0.23
TRAF1-201ENST00000373887 CTC1Q2NKJ3 1217 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 ACBD4Q8NC06 268 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 OR7G2Q8NG99 324 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 CHPT1Q8WUD6 406 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 NR4A3Q92570 626 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 MRM3Q9HC36 420 aaKnown RBP13.61□□□□□ -0.23
TRAF1-201ENST00000373887 IGKV6D-21A0A0A0MT36 114 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 MT-ND2P03891 347 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 RABIFP47224 123 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 IDH3GP51553 393 aaPredicted RBP13.61□□□□□ -0.23
TRAF1-201ENST00000373887 CASP6P55212 293 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 BCL2L15Q5TBC7 163 aa13.61□□□□□ -0.23
TRAF1-201ENST00000373887 LMO3Q8TAP4 145 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms