RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 NT5CQ8TCD5 201 aa17.58■□□□□ 0.41
USP49-202ENST00000373010 PATE1Q8WXA2 126 aa17.58■□□□□ 0.41
USP49-202ENST00000373010 SLC35A4Q96G79 324 aa17.58■□□□□ 0.41
USP49-202ENST00000373010 OR2A5Q96R48 311 aa17.58■□□□□ 0.41
USP49-202ENST00000373010 CLDND1Q9NY35 253 aa17.58■□□□□ 0.41
USP49-202ENST00000373010 CLEC2DQ9UHP7 191 aa17.58■□□□□ 0.41
USP49-202ENST00000373010 OR6C74A6NCV1 312 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 METTL15A6NJ78 407 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 DSCR3O14972 297 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 CASC3O15234 703 aaKnown RBP17.58■□□□□ 0.4
USP49-202ENST00000373010 PRKYO43930 277 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 ALPPP05187 535 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 SLC35G6P0C7Q6 338 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 PIPP12273 146 aaPredicted RBP17.58■□□□□ 0.4
USP49-202ENST00000373010 OLR1P78380 273 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 SIM1P81133 766 aaPredicted RBP17.58■□□□□ 0.4
USP49-202ENST00000373010 HOXC5Q00444 222 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 ZNF404Q494X3 552 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 FCRL6Q6DN72 434 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 C16orf62Q7Z3J2 963 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 RPLP0P6Q8NHW5 317 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 DOK4Q8TEW6 326 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 KCMF1Q9P0J7 381 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 DAPK2Q9UIK4 370 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 CHST2Q9Y4C5 530 aa17.58■□□□□ 0.4
USP49-202ENST00000373010 LOC105369274A0A096LPK9 316 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 LOC102723532A0A0G2JNH3 316 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 FCMRO60667 390 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 HNRNPCP07910 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
USP49-202ENST00000373010 PDX1P52945 283 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 RAB15P59190 212 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 RPS3AP61247 264 aaKnown RBP17.57■□□□□ 0.4
USP49-202ENST00000373010 TNFRSF17Q02223 184 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 RUNX2Q13950 521 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 GPR18Q14330 331 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 GINS1Q14691 196 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 ACSM5Q6NUN0 579 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 TRIM69Q86WT6 500 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 LSRQ86X29 649 aaPredicted RBP17.57■□□□□ 0.4
USP49-202ENST00000373010 TMEFF1Q8IYR6 380 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 OR4N4Q8N0Y3 316 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 OR8J1Q8NGP2 316 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 SLC22A18Q96BI1 424 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 Q96MT0 163 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 ACTRT3Q9BYD9 372 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 ANKMY1Q9P2S6 941 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 ZNF860A6NHJ4 632 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 CPSF4LA6NMK7 179 aaKnown RBP17.57■□□□□ 0.4
USP49-202ENST00000373010 TLX2O43763 284 aaPredicted RBP17.57■□□□□ 0.4
USP49-202ENST00000373010 LIMK1P53667 647 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 TAS2R41P59536 307 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 ALDH6A1Q02252 535 aaKnown RBP17.57■□□□□ 0.4
USP49-202ENST00000373010 ZNF91Q05481 1191 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 KIR2DS3Q14952 304 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 C1orf94Q6P1W5 598 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 FIGLAQ6QHK4 219 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 SFTPA2Q8IWL1 248 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 SLC16A11Q8NCK7 471 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 TM4SF19Q96DZ7 209 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 TSSK6Q9BXA6 273 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 GIN1Q9NXP7 522 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 DOLKQ9UPQ8 538 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 NTNG1Q9Y2I2 539 aa17.57■□□□□ 0.4
USP49-202ENST00000373010 A0A087WUU8 490 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 ARHGAP33O14559 1287 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 ID2Q02363 134 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 SSX1Q16384 188 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 TRIM16LQ309B1 348 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 INAVAQ3KP66 663 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 MFSD4BQ5TF39 518 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 PRAMEF8Q5VWM4 474 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 PRAMEF7Q5VXH5 474 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 CD300LDQ6UXZ3 194 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 KIF18BQ86Y91 864 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 SLC34A3Q8N130 599 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 LRRC25Q8N386 305 aaPredicted RBP17.56■□□□□ 0.4
USP49-202ENST00000373010 FRMD1Q8N878 549 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 TRNT1Q96Q11 434 aaKnown RBP17.56■□□□□ 0.4
USP49-202ENST00000373010 ARHGDIGQ99819 225 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 PLA2G12AQ9BZM1 189 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 C6orf62Q9GZU0 229 aaPredicted RBP17.56■□□□□ 0.4
USP49-202ENST00000373010 EGLN3Q9H6Z9 239 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 SEMA4GQ9NTN9 838 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 ACTR10Q9NZ32 417 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 SLC13A4Q9UKG4 626 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 MRPS2Q9Y399 296 aaKnown RBP17.56■□□□□ 0.4
USP49-202ENST00000373010 EYSQ5T1H1 3165 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 BRWD1Q9NSI6 2320 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 TCRBV21S2A2A0A5A6 115 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 ASNA1O43681 348 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 PVRP15151 417 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 AVPR1BP47901 424 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 COX10Q12887 443 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 ATAD3BQ5T9A4 648 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 C11orf74Q86VG3 221 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 ATCAYQ86WG3 371 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 KBTBD8Q8NFY9 601 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 ADAMTS15Q8TE58 950 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 CDS1Q92903 461 aa17.56■□□□□ 0.4
USP49-202ENST00000373010 TMEM80Q96HE8 168 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms