RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 ERCC1P07992 297 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-203ENST00000372407 RAB33AQ14088 237 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 CDK10Q15131 360 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 ELOCQ15369 112 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 C1orf94Q6P1W5 598 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 TLDC1Q6P9B6 456 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 CHRDL2Q6WN34 429 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 COQ8AQ8NI60 647 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 NRG4Q8WWG1 115 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 MAELQ96JY0 434 aaKnown RBP10.87□□□□□ -0.67
PTPRF-203ENST00000372407 COG8Q96MW5 612 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 PDE7BQ9NP56 450 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 PADI2Q9Y2J8 665 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 MYH7P12883 1935 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 NAV1Q8NEY1 1877 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 BORCS7-ASMTA0A0B4J1R7 106 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 FEZF1A0PJY2 475 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 TRAPPC13A5PLN9 417 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 FAM221BA6H8Z2 402 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 MEN1O00255 615 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 RGS9O75916 674 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 APBB3O95704 486 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 RAB3BP20337 219 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 CD70P32970 193 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 SOX9P48436 509 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 SIM1P81133 766 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 PLGLB1Q02325 96 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 TBC1D25Q3MII6 688 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 DCDC5Q6ZRR9 648 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 MRPL10Q7Z7H8 261 aaKnown RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 OR2T4Q8NH00 348 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 CNN2Q99439 309 aaKnown RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 INPP5KQ9BT40 448 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 RXFP3Q9NSD7 469 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 DZANK1Q9NVP4 752 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 TAS2R8Q9NYW2 309 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 A0A1W2PQL4 384 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 FUOMA2VDF0 154 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 MBLAC1A4D2B0 266 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 TP53I11O14683 189 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 TNFRSF1BP20333 461 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 OPRL1P41146 370 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 LRP8Q14114 963 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 MICAQ29983 383 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 ZNF791Q3KP31 576 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 NDUFAF5Q5TEU4 345 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 TMEM25Q86YD3 366 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 DTX3Q8N9I9 347 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 CHDHQ8NE62 594 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 AGPAT4Q9NRZ5 378 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 SLC39A1Q9NY26 324 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 GJD2Q9UKL4 321 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 EMCNQ9ULC0 261 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 GPR89AB7ZAQ6 455 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 SLC33A1O00400 549 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 GPR89BP0CG08 455 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 PGCP20142 388 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 KEAP1Q14145 624 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 ALG10BQ5I7T1 473 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 CPZQ66K79 652 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 P4HA3Q7Z4N8 544 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 NRMQ8IXM6 262 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 NAXEQ8NCW5 288 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 MSANTD3Q96H12 275 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 OR10A4Q9H209 315 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 NMNAT1Q9HAN9 279 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 OR2S2Q9NQN1 319 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 KCNN3Q9UGI6 736 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 TCRBV3S1A0A5B6 114 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 AGAP5A6NIR3 686 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 SCO2O43819 266 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 KCNJ13O60928 360 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 SDC1P18827 310 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 AGTR1P30556 359 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 WNT4P56705 351 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 COL28A1Q2UY09 1125 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 INAVAQ3KP66 663 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 RNASE10Q5GAN6 216 aaKnown RBP10.86□□□□□ -0.67
PTPRF-203ENST00000372407 SLC22A10Q63ZE4 541 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 PLBD1Q6P4A8 553 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 RNF111Q6ZNA4 994 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 OR4N5Q8IXE1 308 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 R3HDMLQ9H3Y0 253 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 RIMS3Q9UJD0 308 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 GPR45Q9Y5Y3 372 aa10.86□□□□□ -0.67
PTPRF-203ENST00000372407 LY75O60449 1722 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 CACNA1SQ13698 1873 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 ANTXRLA6NF34 631 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 RNGTTO60942 597 aaKnown RBP10.85□□□□□ -0.67
PTPRF-203ENST00000372407 CCNOP22674 350 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 CAPZA1P52907 286 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 ART1P52961 327 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 PLP2Q04941 152 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 PLCXD2Q0VAA5 305 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 TMEM53Q6P2H8 277 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 FIP1L1Q6UN15 594 aaKnown RBP10.85□□□□□ -0.67
PTPRF-203ENST00000372407 TTC9BQ8N6N2 239 aa10.85□□□□□ -0.67
PTPRF-203ENST00000372407 OR52E2Q8NGJ4 325 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms