RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 EVPLLA8MZ36 301 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 E2F3O00716 465 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 SLC16A6O15403 523 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 KLHL18O94889 574 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 WISP3O95389 354 aaPredicted RBP13.96□□□□□ -0.17
LMO4-201ENST00000370542 ITGAMP11215 1152 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 PRF1P14222 555 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 ACPPP15309 386 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 FBLP22087 321 aaKnown RBP13.96□□□□□ -0.17
LMO4-201ENST00000370542 FDXRP22570 491 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 SOX11P35716 441 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 UGT2B10P36537 528 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 POLR2IP36954 125 aaKnown RBP13.96□□□□□ -0.17
LMO4-201ENST00000370542 TIAL1Q01085 375 aaKnown RBP eCLIP13.96□□□□□ -0.17
LMO4-201ENST00000370542 CTBP1Q13363 440 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 SPCS2Q15005 226 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 HKDC1Q2TB90 917 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 VPS26BQ4G0F5 336 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 HECTD2Q5U5R9 776 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 TMEM205Q6UW68 189 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 SLC16A12Q6ZSM3 486 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 NDUFAF7Q7L592 441 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 NANOGNBQ7Z5D8 188 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 SLC34A3Q8N130 599 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 CSNK1A1LQ8N752 337 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 CHDHQ8NE62 594 aaPredicted RBP13.96□□□□□ -0.17
LMO4-201ENST00000370542 DNAJB14Q8TBM8 379 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 FCGR1BQ92637 280 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 THOC3Q96J01 351 aaKnown RBP13.96□□□□□ -0.17
LMO4-201ENST00000370542 DACH2Q96NX9 599 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 SH3GL1Q99961 368 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 MMP27Q9H306 513 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 GORASP2Q9H8Y8 452 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 MKKSQ9NPJ1 570 aaPredicted RBP13.96□□□□□ -0.17
LMO4-201ENST00000370542 SLC52A3Q9NQ40 469 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 C14orf105Q9NVL8 296 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 SCN3BQ9NY72 215 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 STOX2Q9P2F5 926 aaPredicted RBP13.96□□□□□ -0.17
LMO4-201ENST00000370542 SLC5A6Q9Y289 635 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 TESMINQ9Y4I5 508 aa13.96□□□□□ -0.17
LMO4-201ENST00000370542 SVILO95425 2214 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 AKAP9Q99996 3911 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 IDSB3KWA1 339 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 G3V2T6 193 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 CRCPO75575 148 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 SLC22A3O75751 556 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 KRT75O95678 551 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 CYC1P08574 325 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 PRR35P0CG20 571 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 HRH2P25021 359 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 IMPA1P29218 277 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 KRT6CP48668 564 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 ST13P50502 369 aaKnown RBP13.95□□□□□ -0.18
LMO4-201ENST00000370542 EMP2P54851 167 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 ARPC4P59998 168 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 ZNF169Q14929 603 aaPredicted RBP13.95□□□□□ -0.18
LMO4-201ENST00000370542 CTF1Q16619 201 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 GLYATQ6IB77 296 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 HIPK1Q86Z02 1210 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 OR8J3Q8NGG0 315 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 OR9I1Q8NGQ6 314 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 OR5K1Q8NHB7 308 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 DNAJB8Q8NHS0 232 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 RHOXF1Q8NHV9 184 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 FBLIM1Q8WUP2 373 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 FAR1Q8WVX9 515 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 TBC1D20Q96BZ9 403 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 TUBGCP3Q96CW5 907 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 RNF145Q96MT1 663 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 CSF3RQ99062 836 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 GPR21Q99679 349 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 AARSD1Q9BTE6 412 aaKnown RBP13.95□□□□□ -0.18
LMO4-201ENST00000370542 OR2B2Q9GZK3 357 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 ZNF229Q9UJW7 825 aa13.95□□□□□ -0.18
LMO4-201ENST00000370542 MRPS2Q9Y399 296 aaKnown RBP13.95□□□□□ -0.18
LMO4-201ENST00000370542 DIDO1Q9BTC0 2240 aaKnown RBP13.95□□□□□ -0.18
LMO4-201ENST00000370542 IGHV1-45A0A0A0MS14 117 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 A0A1B0GTL3 188 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 SYCE1LA8MT33 242 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 PIP5K1BO14986 540 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 P2RX6O15547 441 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 DYRK3O43781 588 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 SCELO95171 688 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 NADKO95544 446 aaPredicted RBP13.94□□□□□ -0.18
LMO4-201ENST00000370542 MLYCDO95822 493 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 SERPINA7P05543 415 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 EDN3P14138 238 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 ELK4P28324 431 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 EFNA3P52797 238 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 DEFA1P59665 94 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 DEFA3P59666 94 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 SNRPNP63162 240 aaKnown RBP13.94□□□□□ -0.18
LMO4-201ENST00000370542 SYT6Q5T7P8 510 aaPredicted RBP13.94□□□□□ -0.18
LMO4-201ENST00000370542 ZNF324BQ6AW86 544 aaPredicted RBP13.94□□□□□ -0.18
LMO4-201ENST00000370542 UGT3A1Q6NUS8 523 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 VN1R4Q7Z5H5 301 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 STK32CQ86UX6 486 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 P2RY8Q86VZ1 359 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
LMO4-201ENST00000370542 EID3Q8N140 333 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms