RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 RFWD2Q8NHY2 731 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 PSMA8Q8TAA3 256 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 VSTM2LQ96N03 204 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 BTBD9Q96Q07 612 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 TMEM120AQ9BXJ8 343 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 AGPAT4Q9NRZ5 378 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 NTMQ9P121 344 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 KLHL14Q9P2G3 628 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 FAF1Q9UNN5 650 aaPredicted RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 PCDHGB3Q9Y5G1 929 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 NPFFR2Q9Y5X5 522 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 NUP214P35658 2090 aaPredicted RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 RP1L1Q8IWN7 2480 aaPredicted RBP12.71□□□□□ -0.37
SSR4-202ENST00000370085 CFAP46Q8IYW2 2715 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 TO15178 435 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 SUV39H1O43463 412 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 NEURL1O76050 574 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 OR6B1O95007 311 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 KCNH1O95259 989 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 RASAL1O95294 804 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 CRYABP02511 175 aaKnown RBP12.71□□□□□ -0.37
SSR4-202ENST00000370085 PRB1P04280 392 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 FBXO45P0C2W1 286 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 ABCD3P28288 659 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 IL12BP29460 328 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 HBA1P69905 142 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 CYP27C1Q4G0S4 372 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 SLC22A10Q63ZE4 541 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 FAM180AQ6UWF9 173 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 C16orf47Q6ZP98 133 aaPredicted RBP12.71□□□□□ -0.37
SSR4-202ENST00000370085 SLC44A2Q8IWA5 706 aaPredicted RBP12.71□□□□□ -0.37
SSR4-202ENST00000370085 SLC34A3Q8N130 599 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 FAM13CQ8NE31 585 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 FAM120BQ96EK7 910 aaKnown RBP12.71□□□□□ -0.37
SSR4-202ENST00000370085 SIGLEC12Q96PQ1 595 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 PANX1Q96RD7 426 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.37
SSR4-202ENST00000370085 NXF5Q9H1B4 397 aaKnown RBP12.71□□□□□ -0.37
SSR4-202ENST00000370085 ANKRA2Q9H9E1 313 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 EQTNQ9NQ60 294 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 KLHL1Q9NR64 748 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 SACM1LQ9NTJ5 587 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 CNIH4Q9P003 139 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 MAP10Q9P2G4 905 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 BTNL2Q9UIR0 455 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 RALYQ9UKM9 306 aaKnown RBP12.71□□□□□ -0.37
SSR4-202ENST00000370085 GPR55Q9Y2T6 319 aaPredicted RBP12.71□□□□□ -0.37
SSR4-202ENST00000370085 PCDHGA10Q9Y5H3 936 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 CSAG2Q9Y5P2 127 aa12.71□□□□□ -0.37
SSR4-202ENST00000370085 HS6ST1O60243 411 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 NME2P1O60361 137 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 PPM1BO75688 479 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 SORBS2O94875 1100 aaKnown RBP12.7□□□□□ -0.38
SSR4-202ENST00000370085 PSMG1O95456 288 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 ANP32DO95626 131 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 CPSF4O95639 269 aaKnown RBP12.7□□□□□ -0.38
SSR4-202ENST00000370085 ALOX5P09917 674 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 NME2P22392 152 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 UQCRC2P22695 453 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 CHI3L1P36222 383 aaPredicted RBP12.7□□□□□ -0.38
SSR4-202ENST00000370085 ANXA11P50995 505 aaKnown RBP12.7□□□□□ -0.38
SSR4-202ENST00000370085 DUSP8Q13202 625 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 EFR3AQ14156 821 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 NNATQ16517 81 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 NTRK2Q16620 822 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 DECR1Q16698 335 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 TBCELQ5QJ74 424 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 ZNF468Q5VIY5 522 aaPredicted RBP12.7□□□□□ -0.38
SSR4-202ENST00000370085 NUP54Q7Z3B4 507 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 CPLX4Q7Z7G2 160 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 POGLUT1Q8NBL1 392 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 PSD4Q8NDX1 1056 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 DNAJB8Q8NHS0 232 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 SLC9A6Q92581 669 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 JADE3Q92613 823 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 TMCO6Q96DC7 493 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 SCMH1Q96GD3 660 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 ITCHQ96J02 903 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 TEX37Q96LM6 180 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 CCDC115Q96NT0 180 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
SSR4-202ENST00000370085 LMF2Q9BU23 707 aaKnown RBP12.7□□□□□ -0.38
SSR4-202ENST00000370085 CCDC167Q9P0B6 97 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 VPS4AQ9UN37 437 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 DTX4Q9Y2E6 619 aa12.7□□□□□ -0.38
SSR4-202ENST00000370085 COPG1Q9Y678 874 aaKnown RBP12.7□□□□□ -0.38
SSR4-202ENST00000370085 RNF103-CHMP3A0A140T963 221 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 GMNCA6NCL1 334 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 CCDC154A6NI56 674 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 DUXAA6NLW8 204 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 RFXANKO14593 260 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 REM1O75628 298 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 NADKO95544 446 aaPredicted RBP12.69□□□□□ -0.38
SSR4-202ENST00000370085 LSP1P33241 339 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 GABRA3P34903 492 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 SOX18P35713 384 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 DGKQP52824 942 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 WNT3P56703 355 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 GNGT1P63211 74 aa12.69□□□□□ -0.38
SSR4-202ENST00000370085 TXNL4AP83876 142 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms