RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ABCC6O95255 1503 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF860A6NHJ4 632 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 B3GALNT1O75752 331 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 APOA2P02652 100 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SLC2A5P22732 501 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 HTR1EP28566 365 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 GGT2P36268 569 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 GALNT2Q10471 571 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 PPA1Q15181 289 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 LRRC25Q8N386 305 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 TRAM1L1Q8N609 369 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 OR4D6Q8NGJ1 314 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 COG8Q96MW5 612 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 FEZF1A0PJY2 475 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 ADAP00813 363 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SERPINA7P05543 415 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 PBX2P40425 430 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 TDGQ13569 410 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 ESCO2Q56NI9 601 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 C6orf136Q5SQH8 315 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 DPPA2Q7Z7J5 298 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 CHDHQ8NE62 594 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 TRUB1Q8WWH5 349 aaKnown RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 SHDQ96IW2 340 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 IRS2Q9Y4H2 1338 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 MYOCOSA0A1B0GUC4 107 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 A0A1W2PQL4 384 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 ACRP10323 421 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 GPM6BQ13491 265 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 TMEM35AQ53FP2 167 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 BSCL2Q96G97 398 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF559Q9BR84 538 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 TCEAL7Q9BRU2 100 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 GPN2Q9H9Y4 310 aaPredicted RBP11.89□□□□□ -0.51
HCFC1-202ENST00000369984 XPNPEP1Q9NQW7 623 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 GPR83Q9NYM4 423 aa11.89□□□□□ -0.51
HCFC1-202ENST00000369984 AMY2AP04746 511 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 BMXP51813 675 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 CAMK2DQ13557 499 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 RAET1LQ5VY80 246 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 C22orf39Q6P5X5 142 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 GALNT10Q86SR1 603 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 HRASLS2Q9NWW9 162 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 KCNIP1Q9NZI2 227 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 SLC1A7O00341 560 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 UBFD1O14562 309 aaKnown RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 FGF3P11487 239 aaPredicted RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 CRYZQ08257 329 aaKnown RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 TMEM173Q86WV6 379 aaPredicted RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 CCDC71LQ8N9Z2 235 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 CNOT9Q92600 299 aaKnown RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 CDC6Q99741 560 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 SMG9Q9H0W8 520 aaKnown RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 FZD8Q9H461 694 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 KLHL9Q9P2J3 617 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 COQ4Q9Y3A0 265 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 KIF13AQ9H1H9 1805 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 OXSR1O95747 527 aaPredicted RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 MAOAP21397 527 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 SHMT2P34897 504 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 MTNR1AP48039 350 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 RPS21P63220 83 aaKnown RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF33AQ06730 810 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 AAK1Q2M2I8 961 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 KIAA0319Q5VV43 1072 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 PNCKQ6P2M8 343 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 NLRP8Q86W28 1048 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 PSD2Q9BQI7 771 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 LIPT1Q9Y234 373 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 GALTP07902 379 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 ENPP6Q6UWR7 440 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 IGDCC3Q8IVU1 814 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 FAM217AQ8IXS0 508 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF100Q8IYN0 542 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 IQCF1Q8N6M8 205 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 OR52P1PQ8NH57 321 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 TRMT10AQ8TBZ6 339 aaKnown RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 FUNDC2Q9BWH2 189 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 RLIMQ9NVW2 624 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 ZNF142P52746 1687 aaPredicted RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 RAB19A4D1S5 217 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 SOWAHBA6NEL2 793 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 GGT3PA6NGU5 568 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 TP53I11O14683 189 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 PEX10O60683 326 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 DIO3P55073 304 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 CYCSP99999 105 aaKnown RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 OGDHQ02218 1023 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 PCGF3Q3KNV8 242 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 HACD2Q6Y1H2 254 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 PTGDR2Q9Y5Y4 395 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 ESPL1Q14674 2120 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 BHLHE40O14503 412 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 FBLP22087 321 aaKnown RBP11.88□□□□□ -0.51
HCFC1-202ENST00000369984 TMPRSS7Q7RTY8 843 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 COQ10AQ96MF6 247 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 NAALAD2Q9Y3Q0 740 aa11.88□□□□□ -0.51
HCFC1-202ENST00000369984 NFAT5O94916 1531 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms