RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 SIDT1Q9NXL6 827 aaKnown RBP16.21■□□□□ 0.19
UBE3D-203ENST00000369747 FBXW2Q9UKT8 454 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 CES1P1Q9UKY3 287 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 PCDHGA1Q9Y5H4 931 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 HYKKA2RU49 373 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 URADA6NGE7 173 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 ZNF860A6NHJ4 632 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 C5orf58C9J3I9 102 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 J3KTA2 159 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 SLC1A7O00341 560 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 ABCB7O75027 752 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 DNAJB5O75953 348 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 HTR1AP08908 422 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 ITGA2P17301 1181 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 CSTF2P33240 577 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBE3D-203ENST00000369747 XCR1P46094 333 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 RPS6KA3P51812 740 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 NCBP2P52298 156 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBE3D-203ENST00000369747 GABARAPL2P60520 117 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 CDK5R2Q13319 367 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 TRA2AQ13595 282 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBE3D-203ENST00000369747 DUSP7Q16829 419 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 TCTE1Q5JU00 501 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 C18orf63Q68DL7 685 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 ABHD13Q7L211 337 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 CNIH3Q8TBE1 160 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 BBS4Q96RK4 519 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 VCX3AQ9NNX9 186 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 NDRG4Q9ULP0 352 aaKnown RBP16.21■□□□□ 0.19
UBE3D-203ENST00000369747 SH3GLB1Q9Y371 365 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 ZNF451Q9Y4E5 1061 aa16.21■□□□□ 0.19
UBE3D-203ENST00000369747 SEC16AO15027 2179 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 GUCY1B2O75343 617 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 ERAL1O75616 437 aaKnown RBP16.2■□□□□ 0.18
UBE3D-203ENST00000369747 CD247P20963 164 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 NTSP30990 170 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 GPC1P35052 558 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 CDH12P55289 794 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 IL5RAQ01344 420 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 SPIBQ01892 262 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 ROR2Q01974 943 aaKnown RBP16.2■□□□□ 0.18
UBE3D-203ENST00000369747 DUSP2Q05923 314 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 TOP3AQ13472 1001 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-203ENST00000369747 NEDD8Q15843 81 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 ZNF750Q32MQ0 723 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 CLVS1Q8IUQ0 354 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-203ENST00000369747 SLC44A2Q8IWA5 706 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-203ENST00000369747 SETD9Q8NE22 299 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 SUN3Q8TAQ9 357 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 GIPC3Q8TF64 312 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 APOBEC4Q8WW27 367 aaKnown RBP16.2■□□□□ 0.18
UBE3D-203ENST00000369747 ZNF566Q969W8 418 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 CNRIP1Q96F85 164 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-203ENST00000369747 APMAPQ9HDC9 416 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 NAALAD2Q9Y3Q0 740 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 GMPPBQ9Y5P6 360 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 SLC22A7Q9Y694 548 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 HSPE1-MOB4S4R3N1 261 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 KNTC1P50748 2209 aa16.2■□□□□ 0.18
UBE3D-203ENST00000369747 PRAMEF27A3QJZ7 478 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 FITM1A5D6W6 292 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 PROM1O43490 865 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 CCL4P13236 92 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 JUNBP17275 347 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 CCKBRP32239 447 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 PTGER1P34995 402 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 OLR1P78380 273 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 TGM3Q08188 693 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 NPRL3Q12980 569 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 PUM1Q14671 1186 aaKnown RBP eCLIP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 GRM7Q14831 915 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 CDCP2Q5VXM1 449 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 XAF1Q6GPH4 301 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 SLC48A1Q6P1K1 146 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 ZNF605Q86T29 641 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 GPR135Q8IZ08 494 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 AGBL5Q8NDL9 886 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 OR9A4Q8NGU2 314 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 OR52J3Q8NH60 311 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 SLC35G5Q96KT7 338 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 MAPKAP1Q9BPZ7 522 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 OR51I1Q9H343 314 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 CXorf21Q9HAI6 301 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 SERTAD3Q9UJW9 196 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 BLOC1S6Q9UL45 172 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 ENPP4Q9Y6X5 453 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 CELSR3Q9NYQ7 3312 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 A0A0A6YYC8 382 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 A0A1W2PS29 197 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 EFCAB7A8K855 629 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 I3L1I5 382 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 SGK494L7N484 410 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 FOXS1O43638 330 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 GALR3O60755 368 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 MFN2O95140 757 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 TIAF1O95411 115 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 FTH1P19P0C7X4 201 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 TTKP33981 857 aa16.19■□□□□ 0.18
UBE3D-203ENST00000369747 SIM1P81133 766 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-203ENST00000369747 ACY1Q03154 408 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms