RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 VSTM2LQ96N03 204 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 CCDC106Q9BWC9 280 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM3-211ENST00000368531 ADNPQ9H2P0 1102 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 IL1RL2Q9HB29 575 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 MRGBPQ9NV56 204 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 NTMQ9P121 344 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 FAF1Q9UNN5 650 aaPredicted RBP12.85□□□□□ -0.35
TPM3-211ENST00000368531 OR10H1Q9Y4A9 318 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 CSAG2Q9Y5P2 127 aa12.85□□□□□ -0.35
TPM3-211ENST00000368531 EXPH5Q8NEV8 1989 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 OR6B1O95007 311 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 PSMG1O95456 288 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 NADKO95544 446 aaPredicted RBP12.84□□□□□ -0.35
TPM3-211ENST00000368531 IFI6P09912 130 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 CT45A8P0DMV1 189 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 CT45A9P0DMV2 189 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 ACP2P11117 423 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 DRD5P21918 477 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 MATN1P21941 496 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 ADSLP30566 484 aaPredicted RBP12.84□□□□□ -0.35
TPM3-211ENST00000368531 CD96P40200 585 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 CASRP41180 1078 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 RFX3P48380 749 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 CD97P48960 835 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 TRPC1P48995 793 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 PSG6Q00889 435 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 TUBA3CQ13748 450 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 CYLC2Q14093 348 aaPredicted RBP12.84□□□□□ -0.35
TPM3-211ENST00000368531 MAPRE2Q15555 327 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 CT45A2Q5DJT8 189 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 COLEC12Q5KU26 742 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 MFSD12Q6NUT3 480 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 TUBA3EQ6PEY2 450 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 PCSK4Q6UW60 755 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 TREML1Q86YW5 311 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 TAGAPQ8N103 731 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 LGI4Q8N135 537 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 ZADH2Q8N4Q0 377 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 TRIML2Q8N7C3 387 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 ZNF441Q8N8Z8 693 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 SLC16A11Q8NCK7 471 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 OR4N2Q8NGD1 307 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 GPR151Q8TDV0 419 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 PIK3R3Q92569 461 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 TP53INP1Q96A56 240 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 MOAP1Q96BY2 351 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 AURKBQ96GD4 344 aaPredicted RBP12.84□□□□□ -0.35
TPM3-211ENST00000368531 SLC35G5Q96KT7 338 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 UTP23Q9BRU9 249 aaKnown RBP12.84□□□□□ -0.35
TPM3-211ENST00000368531 PAIP1Q9H074 479 aaKnown RBP12.84□□□□□ -0.35
TPM3-211ENST00000368531 MYLK2Q9H1R3 596 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 SLAMF8Q9P0V8 285 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 LEF1Q9UJU2 399 aaPredicted RBP12.84□□□□□ -0.35
TPM3-211ENST00000368531 GPR55Q9Y2T6 319 aaPredicted RBP12.84□□□□□ -0.35
TPM3-211ENST00000368531 PCDHB14Q9Y5E9 798 aa12.84□□□□□ -0.35
TPM3-211ENST00000368531 ANKRD11Q6UB99 2663 aaPredicted RBP12.84□□□□□ -0.35
TPM3-211ENST00000368531 A0A096LPI6 279 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 GXYLT2A0PJZ3 443 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 OR5H15A6NDH6 313 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 FRG2CA6NGY1 282 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 A8MVJ9 347 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 FBP2O00757 339 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 REM1O75628 298 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 DCTN3O75935 186 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 KCNH1O95259 989 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 ALOX5P09917 674 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 CYB561P49447 251 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 NRG3P56975 720 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 DCAF7P61962 342 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 NFYCQ13952 458 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 DUSP5Q16690 384 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 SPINK14Q6IE38 97 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 BHLHB9Q6PI77 547 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 OPN5Q6U736 354 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 MTERF4Q7Z6M4 381 aaKnown RBP12.83□□□□□ -0.36
TPM3-211ENST00000368531 RETREG3Q86VR2 466 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 RNF130Q86XS8 419 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 ARMC10Q8N2F6 343 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 CDRT4Q8N9R6 151 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 OR5D16Q8NGK9 328 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 TSPEARQ8WU66 669 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 TM9SF4Q92544 642 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 TMBIM1Q969X1 311 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 OMA1Q96E52 524 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 SIGLEC12Q96PQ1 595 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 BTBD9Q96Q07 612 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 LRRC37BQ96QE4 947 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 LMF2Q9BU23 707 aaKnown RBP12.83□□□□□ -0.36
TPM3-211ENST00000368531 ACTRT3Q9BYD9 372 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 GPATCH2Q9NW75 528 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 HPF1Q9NWY4 346 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 LUZP4Q9P127 313 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 LRFN1Q9P244 771 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.83□□□□□ -0.36
TPM3-211ENST00000368531 TUBD1Q9UJT1 453 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 NPFFR2Q9Y5X5 522 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 CACNA1BQ00975 2339 aa12.83□□□□□ -0.36
TPM3-211ENST00000368531 MRASO14807 208 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms