RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 HOMEZQ8IX15 550 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 OMA1Q96E52 524 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 ZNF764Q96H86 408 aaPredicted RBP17.37■□□□□ 0.37
CKS1B-203ENST00000368439 RILPQ96NA2 401 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 BBS4Q96RK4 519 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 NODALQ96S42 347 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 CCT7Q99832 543 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 GLIPR2Q9H4G4 154 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 MIEF1Q9NQG6 463 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 ZDHHC2Q9UIJ5 367 aa17.37■□□□□ 0.37
CKS1B-203ENST00000368439 CACNA1DQ01668 2161 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 OR14I1A6ND48 311 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 AQP7O14520 342 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 SUSD5O60279 629 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 TBX19O60806 448 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 PSMG1O95456 288 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 CHEK2O96017 543 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 DHRS4L1P0CG22 281 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 GRNP28799 593 aaKnown RBP17.36■□□□□ 0.37
CKS1B-203ENST00000368439 PTGDSP41222 190 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 SERPINB4P48594 390 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 NCBP2P52298 156 aaKnown RBP eCLIP17.36■□□□□ 0.37
CKS1B-203ENST00000368439 CORO7P57737 925 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 RPL38P63173 70 aaKnown RBP17.36■□□□□ 0.37
CKS1B-203ENST00000368439 MPP2Q14168 576 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 CEP85LQ5SZL2 805 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 XKRXQ6PP77 449 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 NPSR1Q6W5P4 371 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 NUP54Q7Z3B4 507 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 SLC34A3Q8N130 599 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 PKNOX2Q96KN3 472 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 AMDHD1Q96NU7 426 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 STMN4Q9H169 189 aaPredicted RBP17.36■□□□□ 0.37
CKS1B-203ENST00000368439 UBQLN3Q9H347 655 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 FOLH1BQ9HBA9 442 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 ACKR4Q9NPB9 350 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 QPCTLQ9NXS2 382 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 GIMAP2Q9UG22 337 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 TMED5Q9Y3A6 229 aa17.36■□□□□ 0.37
CKS1B-203ENST00000368439 KLF2Q9Y5W3 355 aaPredicted RBP17.36■□□□□ 0.37
CKS1B-203ENST00000368439 A0A087WV62 115 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 NPIPA2E9PIF3 369 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 NPIPA3F8WFD2 350 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 PLOD2O00469 737 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 HCN1O60741 890 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 UGT2B11O75310 529 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 SLITRK5O94991 958 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 SNX4O95219 450 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 MC3RP41968 323 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 PLCXD2Q0VAA5 305 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 PDE7AQ13946 482 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 GXYLT1Q4G148 440 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 ZNF385BQ569K4 471 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 DDIASQ8IXT1 998 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 RPRMLQ8N4K4 120 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 AGR3Q8TD06 166 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 GFM2Q969S9 779 aaKnown RBP17.35■□□□□ 0.37
CKS1B-203ENST00000368439 ZBTB9Q96C00 473 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 TMEM41AQ96HV5 264 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 ZNF597Q96LX8 424 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 C3orf30Q96M34 536 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 JSRP1Q96MG2 331 aaPredicted RBP17.35■□□□□ 0.37
CKS1B-203ENST00000368439 TP63Q9H3D4 680 aaPredicted RBP17.35■□□□□ 0.37
CKS1B-203ENST00000368439 PNPLA3Q9NST1 481 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 SPRR3Q9UBC9 169 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 TNFRSF10DQ9UBN6 386 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 BAIAP2L1Q9UHR4 511 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 C19orf53Q9UNZ5 99 aaPredicted RBP17.35■□□□□ 0.37
CKS1B-203ENST00000368439 ITPR2Q14571 2701 aa17.35■□□□□ 0.37
CKS1B-203ENST00000368439 PRSS44E7EML9 344 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 UPK1AO00322 258 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 TSPAN2O60636 221 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 ERN1O75460 977 aaKnown RBP17.34■□□□□ 0.37
CKS1B-203ENST00000368439 IFI6P09912 130 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 MAN2A2P49641 1150 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 SMSP52788 366 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 RPP38P78345 283 aaKnown RBP17.34■□□□□ 0.37
CKS1B-203ENST00000368439 PSG6Q00889 435 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 TMEM198Q66K66 360 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 ANKRD26P1Q6NSI1 321 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 TMEM107Q6UX40 140 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 NUDCD3Q8IVD9 361 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 OR2L13Q8N349 312 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 TMBIM1Q969X1 311 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 ELP4Q96EB1 424 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 PGM2Q96G03 612 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 SLC35A4Q96G79 324 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 TSSK3Q96PN8 268 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 REEP4Q9H6H4 257 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 TAS2R9Q9NYW1 312 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 ACTL7BQ9Y614 415 aa17.34■□□□□ 0.37
CKS1B-203ENST00000368439 ARHGAP21Q5T5U3 1957 aa17.33■□□□□ 0.37
CKS1B-203ENST00000368439 TRGV5A0A0B4J1U4 118 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 OR6C70A6NIJ9 312 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 BCKDKO14874 412 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 BIRC5O15392 142 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 ITM2AO43736 263 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 LYPLA1O75608 230 aaPredicted RBP17.33■□□□□ 0.36
CKS1B-203ENST00000368439 BCKDHAP12694 445 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 NTSP30990 170 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms