RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TEX12Q9BXU0 123 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 OR2B2Q9GZK3 357 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 SLC22A4Q9H015 551 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 SAP130Q9H0E3 1048 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 NEK6Q9HC98 313 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 PRDM7Q9NQW5 492 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 MUTYHQ9UIF7 546 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 GSTK1Q9Y2Q3 226 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 A0A0G2JN53 185 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 A0A1W2PR48 441 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 OTOL1A6NHN0 477 aaPredicted RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 FAM170BA6NMN3 283 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 PLD2O14939 933 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 ERI3O43414 337 aaKnown RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 ERAL1O75616 437 aaKnown RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 CYP7B1O75881 506 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 ACP5P13686 325 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 F3P13726 295 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 S100A1P23297 94 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 MPIP34949 423 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 MTNR1AP48039 350 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 RFX2P48378 723 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 ST3GAL3Q11203 375 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 HYAL2Q12891 473 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 HNRNPA0Q13151 305 aaKnown RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 CEBPEQ15744 281 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 ZNF311Q5JNZ3 666 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 AGBL4Q5VU57 503 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 SLC48A1Q6P1K1 146 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 CD200R1LQ6Q8B3 271 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 SPATC1Q76KD6 591 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 OR6F1Q8NGZ6 308 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 PIGXQ8TBF5 258 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 CNRIP1Q96F85 164 aaPredicted RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 ZFYVE19Q96K21 471 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 SNX18Q96RF0 628 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 KLHL31Q9H511 634 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 MED17Q9NVC6 651 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 LYARQ9NX58 379 aaKnown RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 PLEKHB1Q9UF11 243 aaPredicted RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 CES1P1Q9UKY3 287 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 SF3B6Q9Y3B4 125 aaKnown RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 A0A1W2PQ09 198 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 GSAPA4D1B5 854 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 C5orf67F2Z3F1 127 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 PGRMC2O15173 223 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 PPM1DO15297 605 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 PRICKLE3O43900 615 aaPredicted RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 PCDH8O95206 1070 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 AIFM1O95831 613 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 MSL3P1P0C860 447 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 PRKAR1BP31321 381 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 DDOSTP39656 456 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 TGM3Q08188 693 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 KRT33BQ14525 404 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 DECR1Q16698 335 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 C22orf42Q6IC83 251 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 FAM131AQ6UXB0 335 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 CACTIN-AS1Q8N1I8 211 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 ANKK1Q8NFD2 765 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 OR8K5Q8NH50 307 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 DIO2Q92813 273 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 OSTF1Q92882 214 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 PAWRQ96IZ0 340 aaKnown RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 OR7D2Q96RA2 312 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 SLC38A1Q9H2H9 487 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 MIXL1Q9H2W2 232 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 ABCB9Q9NP78 766 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 SLC6A20Q9NP91 592 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 MBNL1Q9NR56 388 aaKnown RBP13.43□□□□□ -0.26
CD48-201ENST00000368045 KLHL28Q9NXS3 571 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 SNX7Q9UNH6 387 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 ATG4BQ9Y4P1 393 aa13.43□□□□□ -0.26
CD48-201ENST00000368045 TCF20Q9UGU0 1960 aaKnown RBP13.42□□□□□ -0.26
CD48-201ENST00000368045 PRR19A6NJB7 356 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 SSX4O60224 188 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 ADH1BP00325 375 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 FPR3P25089 353 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 PTBP1P26599 531 aaKnown RBP eCLIP13.42□□□□□ -0.26
CD48-201ENST00000368045 STXBP1P61764 594 aaKnown RBP13.42□□□□□ -0.26
CD48-201ENST00000368045 CAMK1Q14012 370 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 IRF4Q15306 451 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 BAK1Q16611 211 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 FLYWCH1Q4VC44 716 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 ZNF730Q6ZMV8 503 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 RRM2BQ7LG56 351 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 SFTPA1Q8IWL2 248 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 CCDC116Q8IYX3 515 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 POGLUT1Q8NBL1 392 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 MFSD9Q8NBP5 474 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 ARHGAP9Q9BRR9 750 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 YIPF4Q9BSR8 244 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 PLA2G12AQ9BZM1 189 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 OSGEPL1Q9H4B0 414 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 XKR8Q9H6D3 395 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 ANKRA2Q9H9E1 313 aa13.42□□□□□ -0.26
CD48-201ENST00000368045 IMP3Q9NV31 184 aaKnown RBP13.42□□□□□ -0.26
CD48-201ENST00000368045 TRDV1A0A1B0GX56 115 aa13.41□□□□□ -0.26
CD48-201ENST00000368045 A0A1W2PQL4 384 aaPredicted RBP13.41□□□□□ -0.26
CD48-201ENST00000368045 FABP12A6NFH5 140 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms