RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 BEST3Q8N1M1 668 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 TMEM156Q8N614 296 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 RP9Q8TA86 221 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 MIPOL1Q8TD10 442 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 DOK4Q8TEW6 326 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 THAP3Q8WTV1 239 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 NEURL3Q96EH8 262 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 MAGED4Q96JG8 741 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 LRRC37BQ96QE4 947 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 RASL10BQ96S79 203 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 STACQ99469 402 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 UTP23Q9BRU9 249 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 CCDC106Q9BWC9 280 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 ITPAQ9BY32 194 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 ACTRT3Q9BYD9 372 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 SLC25A18Q9H1K4 315 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 Q9N2J8 555 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 DUSP22Q9NRW4 184 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 GPATCH2Q9NW75 528 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 MRTO4Q9UKD2 239 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 FAF1Q9UNN5 650 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 LHX6Q9UPM6 363 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 ERVK-11Q9UQG0 969 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 DTX4Q9Y2E6 619 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 PCDHGB6Q9Y5F9 930 aa12.79□□□□□ -0.36
NSMCE1-201ENST00000361439 RNF103-CHMP3A0A140T963 221 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 OR5H15A6NDH6 313 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 WWP2O00308 870 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 ABCB7O75027 752 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 NKX2-2O95096 273 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 KCNH1O95259 989 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 CPSF4O95639 269 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 KRT75O95678 551 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 WDPCPO95876 746 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 AGR2O95994 175 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 HMGN2P05204 90 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 SOAT1P35610 550 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 ANXA11P50995 505 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 PSMD4P55036 377 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 ARG2P78540 354 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 PSG6Q00889 435 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 ZNF155Q12901 538 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 TP53BP2Q13625 1128 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 CYLC2Q14093 348 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 SAXO2Q658L1 398 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 FCRLBQ6BAA4 426 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 LINC00696Q6ZRV3 163 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 ZNF621Q6ZSS3 439 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 ASB18Q6ZVZ8 466 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 C6orf120Q7Z4R8 191 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 EXD3Q8N9H8 876 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 GOLM1Q8NBJ4 401 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 CCDC197Q8NCU1 140 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 SIMC1Q8NDZ2 872 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 ASB15Q8WXK1 588 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 SECISBP2Q96T21 854 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 NXF5Q9H1B4 397 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 ANKRA2Q9H9E1 313 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 PIEZO2Q9H5I5 2752 aa12.78□□□□□ -0.36
NSMCE1-201ENST00000361439 TLN1Q9Y490 2541 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 ASPDHA6ND91 283 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 A8MVJ9 347 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 NDUFAB1O14561 156 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 ATXN7O15265 892 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 ASNA1O43681 348 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 NADKO95544 446 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 ANP32DO95626 131 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 ALOX5P09917 674 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 PPIBP23284 216 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 PTPN6P29350 595 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 PRDX6P30041 224 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 LCN1P31025 176 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 CHI3L1P36222 383 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 NR0B1P51843 470 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 PRKAG1P54619 331 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 MRPS22P82650 360 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 TUBA3CQ13748 450 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 C6orf10Q5SRN2 563 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 FAM91A1Q658Y4 838 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 CDC73Q6P1J9 531 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 TUBA3EQ6PEY2 450 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 GK5Q6ZS86 529 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 SZRD1Q7Z422 152 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 SLC34A3Q8N130 599 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 AMER2Q8N7J2 671 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 PCYOX1LQ8NBM8 494 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 BCAS4Q8TDM0 211 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 CMTM5Q96DZ9 223 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 SPACA9Q96E40 222 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 SLC35A5Q9BS91 424 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 INPP5KQ9BT40 448 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 PAIP1Q9H074 479 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 PIGUQ9H490 435 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 RAD21L1Q9H4I0 556 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 HPF1Q9NWY4 346 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 THUMPD1Q9NXG2 353 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 CORO2BQ9UQ03 480 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 TP53TG5Q9Y2B4 290 aa12.77□□□□□ -0.37
NSMCE1-201ENST00000361439 NPFFR2Q9Y5X5 522 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms