RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TMBIM6P55061 237 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 GABARAPL2P60520 117 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 SELENOWP63302 87 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 BTBD16Q32M84 506 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 IER5LQ5T953 404 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 HS3ST5Q8IZT8 346 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 GALNT15Q8N3T1 639 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 ZNF675Q8TD23 568 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 MMP27Q9H306 513 aa12.77□□□□□ -0.37
LDB3-202ENST00000361373 SNAPC5O75971 98 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 CELP19835 753 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 AK4P27144 223 aaPredicted RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 MMP12P39900 470 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 GNG2P59768 71 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 DUS1LQ6P1R4 473 aaKnown RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 PAQR7Q86WK9 346 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 EDAQ92838 391 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 SLC41A3Q96GZ6 507 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 CNN2Q99439 309 aaKnown RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 WDR77Q9BQA1 342 aaPredicted RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 ARMC1Q9NVT9 282 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 RDH16O75452 317 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 RIDAP52758 137 aaKnown RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 ARPC4P59998 168 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 MALLQ13021 153 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 HSD17B12Q53GQ0 312 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 PPP1R3BQ86XI6 285 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 TM9SF4Q92544 642 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 MOCOSQ96EN8 888 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 TMEM41AQ96HV5 264 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 SCP2D1Q9UJQ7 156 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 DLGAP1O14490 977 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 AQP9O43315 295 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 DUSP6Q16828 381 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 MARVELD2Q8N4S9 558 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 AGBL5Q8NDL9 886 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 ARRDC3Q96B67 414 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 FEVQ99581 238 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 HS3ST3A1Q9Y663 406 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 PRSS21Q9Y6M0 314 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 COL22A1Q8NFW1 1626 aaPredicted RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 TOGARAM1Q9Y4F4 1720 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 PRRC2BQ5JSZ5 2229 aaKnown RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 A0A0A6YYC8 382 aaPredicted RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 A0A1B0GTW7 788 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 I3L1I5 382 aaPredicted RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 NME4O00746 187 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 NDUFB2O95178 105 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 FESP07332 822 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 HMGA1P17096 107 aaKnown RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 XCR1P46094 333 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 PXNP49023 591 aaPredicted RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 SCRN3Q0VDG4 424 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 C4orf46Q504U0 113 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 CTSL3PQ5NE16 218 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 BAIAP2L2Q6UXY1 529 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 SPATC1Q76KD6 591 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 ZNF534Q76KX8 674 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 TDHQ8IZJ6 230 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 ZNF565Q8N9K5 539 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 NANOS1Q8WY41 292 aaKnown RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 SLC30A2Q9BRI3 323 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 ACPTQ9BZG2 426 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 MOV10Q9HCE1 1003 aaKnown RBP12.76□□□□□ -0.37
LDB3-202ENST00000361373 ETAA1Q9NY74 926 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 PLEKHA6Q9Y2H5 1048 aa12.76□□□□□ -0.37
LDB3-202ENST00000361373 PSKH1P11801 424 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 NR0B1P51843 470 aaKnown RBP12.75□□□□□ -0.37
LDB3-202ENST00000361373 HSD11B2P80365 405 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 NAGSQ8N159 534 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 UBXN10Q96LJ8 280 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 SLC22A12Q96S37 553 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 URM1Q9BTM9 101 aaKnown RBP12.75□□□□□ -0.37
LDB3-202ENST00000361373 TAS2R10Q9NYW0 307 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 DISC1C4P0D8 188 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 CDC40O60508 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
LDB3-202ENST00000361373 OSMP13725 252 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 HTR3AP46098 478 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 AFF3P51826 1226 aaKnown RBP12.75□□□□□ -0.37
LDB3-202ENST00000361373 WSCD2Q2TBF2 565 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 A6NIZ1 184 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 H0YIV9 168 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 GPR75O95800 540 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 GMPRP36959 345 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 RAP1BP61224 184 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 RAP1AP62834 184 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 MRPL58Q14197 206 aaKnown RBP12.75□□□□□ -0.37
LDB3-202ENST00000361373 ZNF829Q3KNS6 432 aaPredicted RBP12.75□□□□□ -0.37
LDB3-202ENST00000361373 SHFQ7M4L6 423 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 UBTD2Q8WUN7 234 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 LRR1Q96L50 414 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 KATNBL1Q9H079 304 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 MED11Q9P086 117 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 TMPRSS11EQ9UL52 423 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 SOCS2O14508 198 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 GPX3P22352 226 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 MC3RP41968 323 aa12.75□□□□□ -0.37
LDB3-202ENST00000361373 MOGQ16653 247 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms