RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CA3P07451 260 aa15.47■□□□□ 0.07
SCAF1-201ENST00000360565 GJA8P48165 433 aa15.47■□□□□ 0.07
SCAF1-201ENST00000360565 WNT4P56705 351 aa15.47■□□□□ 0.07
SCAF1-201ENST00000360565 GFOD2Q3B7J2 385 aa15.47■□□□□ 0.07
SCAF1-201ENST00000360565 TCEAL5Q5H9L2 206 aa15.47■□□□□ 0.07
SCAF1-201ENST00000360565 WDR53Q7Z5U6 358 aaPredicted RBP15.47■□□□□ 0.07
SCAF1-201ENST00000360565 OR8K3Q8NH51 312 aa15.47■□□□□ 0.07
SCAF1-201ENST00000360565 BCL7CQ8WUZ0 217 aaPredicted RBP15.47■□□□□ 0.07
SCAF1-201ENST00000360565 UHRF1Q96T88 793 aaPredicted RBP15.47■□□□□ 0.07
SCAF1-201ENST00000360565 KLHL31Q9H511 634 aa15.47■□□□□ 0.07
SCAF1-201ENST00000360565 PPT2Q9UMR5 302 aa15.47■□□□□ 0.07
SCAF1-201ENST00000360565 TMEM202A6NGA9 273 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 CCKBRP32239 447 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 LMX1AQ8TE12 382 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 FGF13Q92913 245 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 TREX2Q9BQ50 279 aaPredicted RBP15.46■□□□□ 0.07
SCAF1-201ENST00000360565 LTB4R2Q9NPC1 389 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 MRPS17Q9Y2R5 130 aaKnown RBP15.46■□□□□ 0.07
SCAF1-201ENST00000360565 AP1M2Q9Y6Q5 423 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 A0A1W2PQ72 361 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 SLC22A31A6NKX4 558 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 SLC16A6O15403 523 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 EEF1E1O43324 174 aaKnown RBP15.46■□□□□ 0.07
SCAF1-201ENST00000360565 CHMP24386 653 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 COX20Q5RI15 118 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 ANKRD34AQ69YU3 496 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 GDPGP1Q6ZNW5 385 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 DNAJC22Q8N4W6 341 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 RFT1Q96AA3 541 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 SLC41A3Q96GZ6 507 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 PTCHD1Q96NR3 888 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 AMBRA1Q9C0C7 1298 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 PLEKHA1Q9HB21 404 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 SLC25A37Q9NYZ2 338 aa15.46■□□□□ 0.07
SCAF1-201ENST00000360565 CTDSP2O14595 271 aa15.46■□□□□ 0.06
SCAF1-201ENST00000360565 CLEC3AO75596 197 aa15.46■□□□□ 0.06
SCAF1-201ENST00000360565 TSPAN12O95859 305 aa15.46■□□□□ 0.06
SCAF1-201ENST00000360565 CD97P48960 835 aa15.46■□□□□ 0.06
SCAF1-201ENST00000360565 UBE2Q1Q7Z7E8 422 aa15.46■□□□□ 0.06
SCAF1-201ENST00000360565 ZNF761Q86XN6 746 aaPredicted RBP15.46■□□□□ 0.06
SCAF1-201ENST00000360565 CYB561A3Q8NBI2 242 aa15.46■□□□□ 0.06
SCAF1-201ENST00000360565 OR2L5Q8NG80 312 aa15.46■□□□□ 0.06
SCAF1-201ENST00000360565 DKK3Q9UBP4 350 aa15.46■□□□□ 0.06
SCAF1-201ENST00000360565 FOXE1O00358 373 aaPredicted RBP15.45■□□□□ 0.06
SCAF1-201ENST00000360565 C6orf132Q5T0Z8 1188 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 PODNL1Q6PEZ8 512 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 ZNF613Q6PF04 617 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 GPALPP1Q8IXQ4 340 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 RHOXF1Q8NHV9 184 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 PKMYT1Q99640 499 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 TMEM246Q9BRR3 403 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 CCDC32Q9BV29 185 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 NLKQ9UBE8 527 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 C12orf71A8MTZ7 269 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 SLCO2B1O94956 709 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 CSN2P05814 226 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 HTR1AP08908 422 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 OR51L1Q8NGJ5 315 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 OR5M3Q8NGP4 307 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 RNASE11Q8TAA1 199 aaKnown RBP15.45■□□□□ 0.06
SCAF1-201ENST00000360565 ITFG2Q969R8 447 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 DUS3LQ96G46 650 aaKnown RBP15.45■□□□□ 0.06
SCAF1-201ENST00000360565 ZNF385DQ9H6B1 395 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 TAS2R10Q9NYW0 307 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 CEP290O15078 2479 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 TRAPPC13A5PLN9 417 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 KLK8O60259 260 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 MMP12P39900 470 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 GIPRP48546 466 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 TSPAN5P62079 268 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 DESI1Q6ICB0 168 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 ZNF627Q7L945 461 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 TMIEQ8NEW7 156 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 OR52E1Q8NGJ3 308 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 SLC38A5Q8WUX1 472 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 TMEM121BQ9BXQ6 578 aaPredicted RBP15.45■□□□□ 0.06
SCAF1-201ENST00000360565 DPH1Q9BZG8 443 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 B3GNT4Q9C0J1 378 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 IL37Q9NZH6 218 aa15.45■□□□□ 0.06
SCAF1-201ENST00000360565 GPN3Q9UHW5 284 aaPredicted RBP15.45■□□□□ 0.06
SCAF1-201ENST00000360565 SEC14L2O76054 403 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 DBIP07108 87 aaKnown RBP15.44■□□□□ 0.06
SCAF1-201ENST00000360565 FURINP09958 794 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 RNH1P13489 461 aaKnown RBP15.44■□□□□ 0.06
SCAF1-201ENST00000360565 HIST1H1TP22492 207 aaPredicted RBP15.44■□□□□ 0.06
SCAF1-201ENST00000360565 STOMP27105 288 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 PRDX1Q06830 199 aaKnown RBP15.44■□□□□ 0.06
SCAF1-201ENST00000360565 AKIRIN2Q53H80 203 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 NSMAFQ92636 917 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 ITPKCQ96DU7 683 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 POLDIP3Q9BY77 421 aaKnown RBP15.44■□□□□ 0.06
SCAF1-201ENST00000360565 PAQR5Q9NXK6 330 aaPredicted RBP15.44■□□□□ 0.06
SCAF1-201ENST00000360565 GRHPRQ9UBQ7 328 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.44■□□□□ 0.06
SCAF1-201ENST00000360565 PRODHO43272 600 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 AK4P27144 223 aaPredicted RBP15.44■□□□□ 0.06
SCAF1-201ENST00000360565 ISL1P61371 349 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 DEFB110Q30KQ9 67 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 RASSF6Q6ZTQ3 369 aa15.44■□□□□ 0.06
SCAF1-201ENST00000360565 OR6N2Q8NGY6 317 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms